RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 C12orf56Q8IXR9 622 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 MYCT1Q8N699 235 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 TMEM174Q8WUU8 243 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 LACRTQ9GZZ8 138 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 MED4Q9NPJ6 270 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 NLRC4Q9NPP4 1024 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 TRIM10Q9UDY6 481 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 RAB23Q9ULC3 237 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 IPPQ9Y573 584 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 KIF26AQ9ULI4 1882 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-216ENST00000554975 AKAP13Q12802 2813 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 ZMYM2Q9UBW7 1377 aa11.88□□□□□ -0.51
SHMT2-216ENST00000554975 A0A0A6YYK5 440 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-216ENST00000554975 ADAM12O43184 909 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 DGAT1O75907 488 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 PRPF6O94906 941 aaKnown RBP11.87□□□□□ -0.51
SHMT2-216ENST00000554975 UCHL3P15374 230 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 HOXC13P31276 330 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 STAT1P42224 750 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 SHC2P98077 582 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 PFKPQ01813 784 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 CYP27A1Q02318 531 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 RAD51AP2Q09MP3 1159 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 CSRP2Q16527 193 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 GLE1Q53GS7 698 aaKnown RBP11.87□□□□□ -0.51
SHMT2-216ENST00000554975 MAEAQ7L5Y9 396 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 USP37Q86T82 979 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 SYCE1Q8N0S2 351 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 MMGT1Q8N4V1 131 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 RNF149Q8NC42 400 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 PKNOX2Q96KN3 472 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 PAAF1Q9BRP4 392 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 FUT8Q9BYC5 575 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 FAM126AQ9BYI3 521 aaPredicted RBP11.87□□□□□ -0.51
SHMT2-216ENST00000554975 FGFBP2Q9BYJ0 223 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 CHRDQ9H2X0 955 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 ST6GALNAC4Q9H4F1 302 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 RXFP3Q9NSD7 469 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 NDRG2Q9UN36 371 aaKnown RBP11.87□□□□□ -0.51
SHMT2-216ENST00000554975 POLIQ9UNA4 740 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 EXOC7Q9UPT5 735 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 CAPN6Q9Y6Q1 641 aa11.87□□□□□ -0.51
SHMT2-216ENST00000554975 H0YCG3 227 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 K7ENM7 598 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 MAP2K7O14733 419 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 TM4SF5O14894 197 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 ZNF263O14978 683 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 ASAP2O43150 1006 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 HRO43593 1189 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 LRP3O75074 770 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 NOL4O94818 638 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 C1RP00736 705 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 C8AP07357 584 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 RHOXF2BP0C7M4 288 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 ITGA4P13612 1032 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 RARRES1P49788 294 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 CASP5P51878 434 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 ENPEPQ07075 957 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 ADCY1Q08828 1119 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 TFDP1Q14186 410 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 MXD4Q14582 209 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-216ENST00000554975 ACAP1Q15027 740 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 NAB2Q15742 525 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 USP41Q3LFD5 358 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 CFAP221Q4G0U5 840 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 BEND6Q5SZJ8 279 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-216ENST00000554975 KLHDC7AQ5VTJ3 777 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 ZNF852Q6ZMS4 543 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 INTS8Q75QN2 995 aaKnown RBP11.86□□□□□ -0.51
SHMT2-216ENST00000554975 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 CELF5Q8N6W0 485 aaKnown RBP11.86□□□□□ -0.51
SHMT2-216ENST00000554975 GSTCDQ8NEC7 633 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 TAF4BQ92750 862 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 SLC35C1Q96A29 364 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 CPB2Q96IY4 423 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 OSBPL9Q96SU4 736 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 CLSTN3Q9BQT9 956 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 RHOXF2Q9BQY4 288 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 POLR3FQ9H1D9 316 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-216ENST00000554975 XPNPEP1Q9NQW7 623 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.86□□□□□ -0.51
SHMT2-216ENST00000554975 DNMT3BQ9UBC3 853 aaKnown RBP11.86□□□□□ -0.51
SHMT2-216ENST00000554975 KCNG1Q9UIX4 513 aa11.86□□□□□ -0.51
SHMT2-216ENST00000554975 CCDC66A2RUB6 948 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 RCCD1A6NED2 376 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 C1QTNF9BB2RNN3 333 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 CHURC1-FNTBB4DL54 471 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 INO80B-WBP1J3KQ70 363 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 ENC1O14682 589 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 NCAM2O15394 837 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 PPP1R37O75864 691 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 AKAP3O75969 853 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 ERLIN2O94905 339 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 SEC31AO94979 1220 aaKnown RBP11.85□□□□□ -0.51
SHMT2-216ENST00000554975 PROS1P07225 676 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 PLEKP08567 350 aaPredicted RBP11.85□□□□□ -0.51
SHMT2-216ENST00000554975 HNRNPA1P09651 372 aaKnown RBP eCLIP11.85□□□□□ -0.51
SHMT2-216ENST00000554975 C1QTNF9P0C862 333 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 TNFRSF8P28908 595 aa11.85□□□□□ -0.51
SHMT2-216ENST00000554975 OAS2P29728 719 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms