RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 TSPAN18Q96SJ8 248 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 CYP2S1Q96SQ9 504 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 PARVGQ9HBI0 331 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 FSCN3Q9NQT6 498 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 TMEM74BQ9NUR3 256 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 UXTQ9UBK9 157 aaPredicted RBP14.24□□□□□ -0.13
TUBB3-207ENST00000554927 MBD1Q9UIS9 605 aaPredicted RBP14.24□□□□□ -0.13
TUBB3-207ENST00000554927 MMP17Q9ULZ9 603 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 GPSM3Q9Y4H4 160 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 NUP205Q92621 2012 aa14.24□□□□□ -0.13
TUBB3-207ENST00000554927 THADAQ6YHU6 1953 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 NPHP3-ACAD11A0A0J9YXS1 232 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 TULP1O00294 542 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-207ENST00000554927 HNRNPDLO14979 420 aaKnown RBP14.23□□□□□ -0.13
TUBB3-207ENST00000554927 OGTO15294 1046 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 TRAK2O60296 914 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 OPHN1O60890 802 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 ZIC2O95409 532 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-207ENST00000554927 NFATC1O95644 943 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 NFICP08651 508 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 DDIT3P35638 169 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 P2RY2P41231 377 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 DPP6P42658 865 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 NCKAP1LP55160 1127 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 TSPY1Q01534 308 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 GFPT1Q06210 699 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-207ENST00000554927 SCAPQ12770 1279 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 CRY1Q16526 586 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 ZNF423Q2M1K9 1284 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 WSCD1Q658N2 575 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 CD302Q8IX05 232 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 FRMD1Q8N878 549 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 SH3RF2Q8TEC5 729 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 RAD54LQ92698 747 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 FNBP1Q96RU3 617 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 REEP2Q9BRK0 252 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 LINC00597Q9H2U6 94 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 TMEM206Q9H813 350 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 CACNA1EQ15878 2313 aa14.23□□□□□ -0.13
TUBB3-207ENST00000554927 ASCC3Q8N3C0 2202 aaKnown RBP14.22□□□□□ -0.13
TUBB3-207ENST00000554927 ANTXRLA6NF34 631 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 UPK3BL1B0FP48 263 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 UPK3BL2E5RIL1 263 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 K7ENM7 598 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 K7EQS6 105 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 PIRO00625 290 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 KLF8O95600 359 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-207ENST00000554927 PLCG1P19174 1290 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 ITPKAP23677 461 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 TAF6P49848 677 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 RPL10AP62906 217 aaKnown RBP14.22□□□□□ -0.13
TUBB3-207ENST00000554927 FAM193AP78312 1265 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 USP4Q13107 963 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 MCM6Q14566 821 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 KCNB1Q14721 858 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 DDR2Q16832 855 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 ARSHQ5FYA8 562 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 SLC23A3Q6PIS1 610 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 ALLCQ8N6M5 410 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 ARL14EPQ8N8R7 260 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-207ENST00000554927 OLIG1Q8TAK6 271 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 HMGB4Q8WW32 186 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 LARP4BQ92615 738 aaKnown RBP14.22□□□□□ -0.13
TUBB3-207ENST00000554927 INTS4Q96HW7 963 aaKnown RBP14.22□□□□□ -0.13
TUBB3-207ENST00000554927 SLC22A12Q96S37 553 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 MSTO1Q9BUK6 570 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 CCSER1Q9C0I3 900 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 POLMQ9NP87 494 aaPredicted RBP14.22□□□□□ -0.13
TUBB3-207ENST00000554927 IGSF10Q6WRI0 2623 aa14.22□□□□□ -0.13
TUBB3-207ENST00000554927 TADA3O75528 432 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 TIE1P35590 1138 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 OPRD1P41143 372 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 MRPS21P82921 87 aaKnown RBP14.21□□□□□ -0.13
TUBB3-207ENST00000554927 BYSLQ13895 437 aaKnown RBP14.21□□□□□ -0.13
TUBB3-207ENST00000554927 DUOXA1Q1HG43 343 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 TMEM92Q6UXU6 159 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 DEFB119Q8N690 84 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 FSIP1Q8NA03 581 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 TXNDC5Q8NBS9 432 aaKnown RBP14.21□□□□□ -0.13
TUBB3-207ENST00000554927 CEP76Q8TAP6 659 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 HNRNPLLQ8WVV9 542 aaKnown RBP14.21□□□□□ -0.13
TUBB3-207ENST00000554927 CCDC86Q9H6F5 360 aaKnown RBP14.21□□□□□ -0.13
TUBB3-207ENST00000554927 TMLHEQ9NVH6 421 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 SLC6A14Q9UN76 642 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 PCDHB9Q9Y5E1 797 aa14.21□□□□□ -0.13
TUBB3-207ENST00000554927 FLNBO75369 2602 aaKnown RBP14.2□□□□□ -0.14
TUBB3-207ENST00000554927 WDFY3Q8IZQ1 3526 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 ANO9A1A5B4 782 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 FAM221BA6H8Z2 402 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 MYMKA6NI61 221 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 HNRNPLP14866 589 aaKnown RBP eCLIP14.2□□□□□ -0.14
TUBB3-207ENST00000554927 SYT1P21579 422 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 HNRNPDQ14103 355 aaKnown RBP14.2□□□□□ -0.14
TUBB3-207ENST00000554927 NFE2Q16621 373 aaPredicted RBP14.2□□□□□ -0.14
TUBB3-207ENST00000554927 ZC2HC1CQ53FD0 456 aaPredicted RBP14.2□□□□□ -0.14
TUBB3-207ENST00000554927 RRAGBQ5VZM2 374 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 SLFN12LQ6IEE8 588 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 RAB44Q7Z6P3 723 aaPredicted RBP14.2□□□□□ -0.14
TUBB3-207ENST00000554927 MINDY1Q8N5J2 469 aa14.2□□□□□ -0.14
TUBB3-207ENST00000554927 SPRYD3Q8NCJ5 442 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 143.7 ms