RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 VITQ6UXI7 678 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 ACOT1Q86TX2 421 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 ARID3BQ8IVW6 561 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 ELOA2Q8IYF1 753 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 MAB21L3Q8N8X9 362 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 B3GALNT2Q8NCR0 500 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 TAS1R2Q8TE23 839 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 DEPDC1BQ8WUY9 529 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 E2F7Q96AV8 911 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 DHTKD1Q96HY7 919 aaPredicted RBP11.36□□□□□ -0.59
SHMT2-213ENST00000554600 TNIP3Q96KP6 325 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 PRRX2Q99811 253 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 SDCBP2Q9H190 292 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 KCNH6Q9H252 994 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 TASP1Q9H6P5 420 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 VRTNQ9H8Y1 702 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 IL21Q9HBE4 155 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 TMEM8AQ9HCN3 771 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 TRPC7Q9HCX4 862 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 CTNND2Q9UQB3 1225 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 NME7Q9Y5B8 376 aa11.36□□□□□ -0.59
SHMT2-213ENST00000554600 F8VP50 259 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 CLDN5O00501 218 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 TRIM66O15016 1216 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 SLC16A3O15427 465 aaKnown RBP11.35□□□□□ -0.59
SHMT2-213ENST00000554600 PI15O43692 258 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 NOL4O94818 638 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 F11P03951 625 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 CD44P16070 742 aaKnown RBP11.35□□□□□ -0.59
SHMT2-213ENST00000554600 CD58P19256 250 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 AOC1P19801 751 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 STX17P56962 302 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 PRKCQQ04759 706 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 CCDC40Q4G0X9 1142 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 KRT39Q6A163 491 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 TPRG1Q6ZUI0 275 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 MFSD6LQ8IWD5 586 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 PRSS33Q8NF86 280 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 CSGALNACT1Q8TDX6 532 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 NELFBQ8WX92 580 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 IRF7Q92985 503 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 B3GNT5Q9BYG0 378 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 FOXQ1Q9C009 403 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 ZNF518BQ9C0D4 1074 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 ELOVL4Q9GZR5 314 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 SMG9Q9H0W8 520 aaKnown RBP11.35□□□□□ -0.59
SHMT2-213ENST00000554600 TRPV4Q9HBA0 871 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 HEBP1Q9NRV9 189 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 ARMCX3Q9UH62 379 aaPredicted RBP11.35□□□□□ -0.59
SHMT2-213ENST00000554600 USP34Q70CQ2 3546 aa11.35□□□□□ -0.59
SHMT2-213ENST00000554600 BICDL2A1A5D9 508 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 PRAMEF12O95522 483 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 ABL1P00519 1130 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 CKMP06732 381 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 DCNP07585 359 aaKnown RBP11.34□□□□□ -0.59
SHMT2-213ENST00000554600 CCDC130P13994 396 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 CD72P21854 359 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 DDX6P26196 483 aaKnown RBP eCLIP11.34□□□□□ -0.59
SHMT2-213ENST00000554600 GTF2H1P32780 548 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 ASPAP45381 313 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 NDST1P52848 882 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 PTPN5P54829 565 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 ENPEPQ07075 957 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 MORC3Q14149 939 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 WDR44Q5JSH3 913 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 TXNDC8Q6A555 127 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 DENND5BQ6ZUT9 1274 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 FAM35AQ86V20 835 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 CMTM8Q8IZV2 173 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 CELF5Q8N6W0 485 aaKnown RBP11.34□□□□□ -0.59
SHMT2-213ENST00000554600 FBXL13Q8NEE6 735 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 DNASE1L2Q92874 299 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 RSPRY1Q96DX4 576 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 TRMT2BQ96GJ1 504 aaKnown RBP11.34□□□□□ -0.59
SHMT2-213ENST00000554600 SPATA17Q96L03 361 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 SLC46A2Q9BY10 475 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 DNAI2Q9GZS0 605 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 NIF3L1Q9GZT8 377 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 KRT82Q9NSB4 513 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 FAM49BQ9NUQ9 324 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 EHD2Q9NZN4 543 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 HMGXB4Q9UGU5 601 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 ZMYM5Q9UJ78 669 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 SIT1Q9Y3P8 196 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 FANCMQ8IYD8 2048 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 NCANO14594 1321 aa11.34□□□□□ -0.59
SHMT2-213ENST00000554600 TRAV19A0A0A6YYK7 116 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 KANSL1LA0AUZ9 987 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 H0Y858 1186 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-213ENST00000554600 LRRN2O75325 713 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 AP1G2O75843 785 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 ADORA2BP29275 332 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 KPNA1P52294 538 aaPredicted RBP11.33□□□□□ -0.6
SHMT2-213ENST00000554600 STARD6P59095 220 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 USP46P62068 366 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 PAK1Q13153 545 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 ARHGAP29Q52LW3 1261 aa11.33□□□□□ -0.6
SHMT2-213ENST00000554600 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms