RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 CUTAO60888 179 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RNF40O75150 1001 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NDUFS2O75306 463 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ATG7O95352 703 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SEC24AO95486 1093 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 EDN1P05305 212 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 USP17L7P0C7H9 530 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 XRCC6P12956 609 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 LAMP2P13473 410 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 XPAP23025 273 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 AXLP30530 894 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ARL2P36404 184 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ATP11AP98196 1134 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ITKQ08881 620 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PDIA5Q14554 519 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ANGPT1Q15389 498 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DUSP6Q16828 381 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 C4orf46Q504U0 113 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SERPINA13PQ6UXR4 307 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RSPO2Q6UXX9 243 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF852Q6ZMS4 543 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 C1orf186Q6ZWK4 172 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 KDELC2Q7Z4H8 507 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ITIH5Q86UX2 942 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 COLGALT2Q8IYK4 626 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TAB3Q8N5C8 712 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FRMD1Q8N878 549 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TSTD1Q8NFU3 115 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 VN1R2Q8NFZ6 395 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SH3RF2Q8TEC5 729 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SCFD1Q8WVM8 642 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SORCS1Q8WY21 1168 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CYFIP2Q96F07 1278 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SHDQ96IW2 340 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RPL10LQ96L21 214 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PRIMPOLQ96LW4 560 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NECTIN4Q96NY8 510 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 GBP4Q96PP9 640 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MTMR9Q96QG7 549 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PLVAPQ9BX97 442 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PRKD2Q9BZL6 878 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 BRINP2Q9C0B6 783 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF518BQ9C0D4 1074 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DNAI2Q9GZS0 605 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DPEP3Q9H4B8 488 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PLEKHA4Q9H4M7 779 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SMYD3Q9H7B4 428 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TMEM206Q9H813 350 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 UBE2TQ9NPD8 197 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FSCN3Q9NQT6 498 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RYDENQ9NUL5 291 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DNAJC17Q9NVM6 304 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CACNA2D2Q9NY47 1150 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 LMCD1Q9NZU5 365 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DNMT3BQ9UBC3 853 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 LSM7Q9UK45 103 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CDV3Q9UKY7 258 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PLA2G4CQ9UP65 541 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SRPRBQ9Y5M8 271 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 INSL5Q9Y5Q6 135 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CPQQ9Y646 472 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 STK36Q9NRP7 1315 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DOCK9Q9BZ29 2069 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MYO15AQ9UKN7 3530 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ARHGEF37A1IGU5 675 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 C2orf78A6NCI8 922 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 F5H423 210 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 M0QYV0 167 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SH3BP5O60239 455 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CAND2O75155 1236 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 LDHAP00338 332 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NR3C1P04150 777 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NCAM1P13591 858 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 HLA-EP13747 358 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ARSAP15289 507 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PSMC3P17980 439 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 VAMP1P23763 118 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PI4KAP42356 2102 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 CXCL12P48061 93 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NOVP48745 357 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RCAN1P53805 252 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 PTPN5P54829 565 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 RPL10AP62906 217 aaKnown RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DLG4P78352 724 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 MGAT3Q09327 533 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 GRSF1Q12849 480 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FOXC1Q12948 553 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NFE2Q16621 373 aaPredicted RBP2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SLC5A9Q2M3M2 681 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ARSHQ5FYA8 562 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 UBXN11Q5T124 520 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 FAM182AQ5T1J6 154 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 DMRTA1Q5VZB9 504 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SMYD5Q6GMV2 418 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 TCEAL6Q6IPX3 200 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 SHC4Q6S5L8 630 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 NUDT18Q6ZVK8 323 aa2.66□□□□□ -1.98
PRPF39-205ENST00000554081 ZNF720Q7Z2F6 126 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms