RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 ZNF268Q14587 947 aaPredicted RBP8.32□□□□□ -1.08
ABCD4-220ENST00000553998 PDGFRLQ15198 375 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 KMT5BQ4FZB7 885 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 FAM26FQ5R3K3 315 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 OVOS1Q6IE37 1185 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 PIP4P1Q86T03 277 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 USP37Q86T82 979 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 TMEM150AQ86TG1 271 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 CCDC26Q8TAB7 109 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 ZCCHC14Q8WYQ9 949 aaKnown RBP8.32□□□□□ -1.08
ABCD4-220ENST00000553998 USP13Q92995 863 aaPredicted RBP8.32□□□□□ -1.08
ABCD4-220ENST00000553998 EXOC4Q96A65 974 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 ZBTB45Q96K62 511 aaPredicted RBP8.32□□□□□ -1.08
ABCD4-220ENST00000553998 HHIPQ96QV1 700 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 P2RY13Q9BPV8 354 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 TCHPQ9BT92 498 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 STRA6Q9BX79 667 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 CLSTN2Q9H4D0 955 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 EBF3Q9H4W6 596 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 TMEM206Q9H813 350 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 KIF9Q9HAQ2 790 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 UBQLN1Q9UMX0 589 aaKnown RBP8.32□□□□□ -1.08
ABCD4-220ENST00000553998 EXOC7Q9UPT5 735 aa8.32□□□□□ -1.08
ABCD4-220ENST00000553998 SDK1Q7Z5N4 2213 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 UBE4BO95155 1302 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.31□□□□□ -1.08
ABCD4-220ENST00000553998 H0Y626 953 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 KIF20AO95235 890 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 TRIM16O95361 564 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 GCNT3O95395 438 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 CLTAP09496 248 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 PRR29P0C7W0 189 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 HMGA1P17096 107 aaKnown RBP8.31□□□□□ -1.08
ABCD4-220ENST00000553998 ATF6P18850 670 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 CASP1P29466 404 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 NMT1P30419 496 aaKnown RBP8.31□□□□□ -1.08
ABCD4-220ENST00000553998 LILRA4P59901 499 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 SNRPFP62306 86 aaKnown RBP8.31□□□□□ -1.08
ABCD4-220ENST00000553998 CYP4F8P98187 520 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 SMARCB1Q12824 385 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 PNOCQ13519 176 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 BMT2Q1RMZ1 405 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 USP39Q53GS9 565 aaKnown RBP8.31□□□□□ -1.08
ABCD4-220ENST00000553998 SPDYCQ5MJ68 293 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 L1TD1Q5T7N2 865 aaKnown RBP8.31□□□□□ -1.08
ABCD4-220ENST00000553998 TRIM68Q6AZZ1 485 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 ARMCX5Q6P1M9 558 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 MON1AQ86VX9 555 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 TTC9BQ8N6N2 239 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 RPLP0P6Q8NHW5 317 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 OLIG1Q8TAK6 271 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 C2orf15Q8WU43 125 aaKnown RBP8.31□□□□□ -1.08
ABCD4-220ENST00000553998 SMARCE1Q969G3 411 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 ACDQ96AP0 544 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 ACCSQ96QU6 501 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 ZCWPW1Q9H0M4 648 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 TDP1Q9NUW8 608 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 CCL26Q9Y258 94 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 PCDHA5Q9Y5H7 936 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 CELSR3Q9NYQ7 3312 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 TCHHQ07283 1943 aa8.31□□□□□ -1.08
ABCD4-220ENST00000553998 SETXQ7Z333 2677 aaKnown RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 PATE3B3GLJ2 98 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 PIRO00625 290 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 TNFRSF10BO14763 440 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 CLDN3O15551 220 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 HYAL3O43820 417 aaPredicted RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 FAM189A1O60320 539 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SOAT2O75908 522 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 HAPLN1P10915 354 aaPredicted RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 ARSAP15289 507 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 TCF3P15923 654 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 AVPR1AP37288 418 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 PPP1R2P41236 205 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 NLRP12P59046 1061 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 LMAN2Q12907 356 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SEMA3BQ13214 749 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 NOLC1Q14978 699 aaKnown RBP eCLIP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 VEPH1Q14D04 833 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 KYAT1Q16773 422 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SEZ6Q53EL9 994 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SOWAHCQ53LP3 525 aaPredicted RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 COBLL1Q53SF7 1204 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SPATA1Q5VX52 437 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 PEAR1Q5VY43 1037 aaPredicted RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SLFN12LQ6IEE8 588 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 DSTYKQ6XUX3 929 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 EPM2AIP1Q7L775 607 aaPredicted RBP8.3□□□□□ -1.08
ABCD4-220ENST00000553998 PROSER1Q86XN7 944 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 TMEM130Q8N3G9 435 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 TRIML1Q8N9V2 468 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 DEFB124Q8NES8 71 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 OR10T2Q8NGX3 314 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 RIN3Q8TB24 985 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 ZNF507Q8TCN5 953 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SPPL2BQ8TCT7 592 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 GPT2Q8TD30 523 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 CD101Q93033 1021 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 COL26A1Q96A83 441 aa8.3□□□□□ -1.08
ABCD4-220ENST00000553998 SENP8Q96LD8 212 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms