RNA–Protein interactions for RNA: ENST00000553938.5

SPTB-206, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 3,456 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-206ENST00000553938 FAM200BP0CF97 657 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 MARK3P27448 753 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 RFC1P35251 1148 aaPredicted RBP12.7□□□□□ -0.38
SPTB-206ENST00000553938 USP46P62068 366 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 CCNG2Q16589 344 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 CDHR3Q6ZTQ4 885 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 SAMD7Q7Z3H4 446 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 OGFOD1Q8N543 542 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 MORC4Q8TE76 937 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 GMLQ99445 158 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 RNF146Q9NTX7 359 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 ARL8BQ9NVJ2 186 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 CHMP2BQ9UQN3 213 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 DNALI1O14645 258 aaPredicted RBP12.7□□□□□ -0.38
SPTB-206ENST00000553938 HNRNPRO43390 633 aaKnown RBP12.7□□□□□ -0.38
SPTB-206ENST00000553938 GRAP2O75791 330 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 CCNB1P14635 433 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 POLGP54098 1239 aaPredicted RBP12.7□□□□□ -0.38
SPTB-206ENST00000553938 RAD23BP54727 409 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 GCNT1Q02742 428 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 KHDC1Q4VXA5 237 aaKnown RBP12.7□□□□□ -0.38
SPTB-206ENST00000553938 RNASEH2BQ5TBB1 312 aaKnown RBP12.7□□□□□ -0.38
SPTB-206ENST00000553938 LMNTD2Q8IXW0 634 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 ZNF276Q8N554 614 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 ACTL9Q8TC94 416 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 TCP10LQ8TDR4 215 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 P3H4Q92791 437 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 CYP26B1Q9NR63 512 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 PIH1D1Q9NWS0 290 aaKnown RBP12.7□□□□□ -0.38
SPTB-206ENST00000553938 SLC17A6Q9P2U8 582 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 PCDHA10Q9Y5I2 948 aa12.7□□□□□ -0.38
SPTB-206ENST00000553938 USP34Q70CQ2 3546 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 CCDC195A0A1B0GUA6 201 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 TYROBPO43914 113 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 ACTR2P61160 394 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 OTUD4Q01804 1114 aaKnown RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 SPARCL1Q14515 664 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 BBS9Q3SYG4 887 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 SPOCD1Q6ZMY3 1216 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 ARHGEF18Q6ZSZ5 1173 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 PRPF39Q86UA1 669 aaKnown RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 ZNF75CPQ92670 426 aaPredicted RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 ABTB1Q969K4 478 aaPredicted RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 LRRC37BQ96QE4 947 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 MRIQ9BWK5 157 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 STMN4Q9H169 189 aaPredicted RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 CFAP69A5D8W1 941 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 ONECUT3O60422 494 aaPredicted RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 EDF1O60869 148 aaKnown RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 NPTXRO95502 500 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 ETS2P15036 469 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 STRN3Q13033 797 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 RIPK1Q13546 671 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 SNRNP48Q6IEG0 339 aaKnown RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 PLEKHA7Q6IQ23 1121 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 GPAT2Q6NUI2 795 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 ZC3H18Q86VM9 953 aaKnown RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 FAM71DQ8N9W8 422 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 FEZF2Q8TBJ5 459 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 FBF1Q8TES7 1133 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 C17orf50Q8WW18 174 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 SERAC1Q96JX3 654 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 EHMT1Q9H9B1 1298 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 GINM1Q9NU53 330 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 ARHGAP28Q9P2N2 729 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 MARCOQ9UEW3 520 aaPredicted RBP12.69□□□□□ -0.38
SPTB-206ENST00000553938 ARID2Q68CP9 1835 aa12.69□□□□□ -0.38
SPTB-206ENST00000553938 CFAP73A6NFT4 308 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 SETDB1Q15047 1291 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 DENND1BQ6P3S1 775 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 CCNJLQ8IV13 435 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 ALLCQ8N6M5 410 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 CCDC89Q8N998 374 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 WDR60Q8WVS4 1066 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 TRAPPC12Q8WVT3 735 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 NRG4Q8WWG1 115 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 CPT1BQ92523 772 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 CLPTM1LQ96KA5 538 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 ST6GALNAC4Q9H4F1 302 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 PDLIM7Q9NR12 457 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 CYB561D2O14569 222 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 NR1H3Q13133 447 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 OASLQ15646 514 aaKnown RBP12.68□□□□□ -0.38
SPTB-206ENST00000553938 CTC1Q2NKJ3 1217 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 WDR44Q5JSH3 913 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 OLFML1Q6UWY5 402 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 CEP128Q6ZU80 1094 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 ALYREFQ86V81 257 aaKnown RBP12.68□□□□□ -0.38
SPTB-206ENST00000553938 FAM160B2Q86V87 743 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 SPNS2Q8IVW8 549 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 KATNAL2Q8IYT4 538 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 LRRC71Q8N4P6 559 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 FBXO36Q8NEA4 188 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 PPP1R13LQ8WUF5 828 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 MSTO1Q9BUK6 570 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 NXF1Q9UBU9 619 aaKnown RBP12.68□□□□□ -0.38
SPTB-206ENST00000553938 RABGEF1Q9UJ41 708 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 CNTNAP2Q9UHC6 1331 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 TRIP11Q15643 1979 aa12.68□□□□□ -0.38
SPTB-206ENST00000553938 hCG_1818297A0A087WSY0 165 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms