RNA–Protein interactions for RNA: ENST00000553851.2

PRAF2-202, Transcript of PRA1 domain family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAF2, Length 1,334 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAF2-202ENST00000553851 ENGASEQ8NFI3 743 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 FAM3CQ92520 227 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 ZFYVE19Q96K21 471 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 SPATA17Q96L03 361 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 SPATA6Q9NWH7 488 aaPredicted RBP21.55■■□□□ 1.04
PRAF2-202ENST00000553851 USP34Q70CQ2 3546 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 SOBPA7XYQ1 873 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 TADA3O75528 432 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 AKAP3O75969 853 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 RPL13P26373 211 aaKnown RBP21.55■■□□□ 1.04
PRAF2-202ENST00000553851 MAGEA9P43362 315 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 RAP1GAPP47736 663 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 KPNA1P52294 538 aaPredicted RBP21.55■■□□□ 1.04
PRAF2-202ENST00000553851 ADAM9Q13443 819 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 SGSM1Q2NKQ1 1148 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 SCARA5Q6ZMJ2 495 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 USP13Q92995 863 aaPredicted RBP21.55■■□□□ 1.04
PRAF2-202ENST00000553851 THG1LQ9NWX6 298 aaKnown RBP21.55■■□□□ 1.04
PRAF2-202ENST00000553851 CCL26Q9Y258 94 aa21.55■■□□□ 1.04
PRAF2-202ENST00000553851 TICRRQ7Z2Z1 1910 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 NUP210Q8TEM1 1887 aaPredicted RBP21.54■■□□□ 1.04
PRAF2-202ENST00000553851 GFRA3O60609 400 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 CCNE1P24864 410 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 ANXA13P27216 316 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 MLLT6P55198 1093 aaPredicted RBP21.54■■□□□ 1.04
PRAF2-202ENST00000553851 PLCB2Q00722 1185 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 FAM160A1Q05DH4 1040 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 INTS8Q75QN2 995 aaKnown RBP21.54■■□□□ 1.04
PRAF2-202ENST00000553851 FAM186BQ8IYM0 893 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 ZNF687Q8N1G0 1237 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 B3GALNT2Q8NCR0 500 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 TTC8Q8TAM2 541 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 CEP295NLQ96MC4 621 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 C8orf33Q9H7E9 229 aaPredicted RBP21.54■■□□□ 1.04
PRAF2-202ENST00000553851 TDP1Q9NUW8 608 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 RMND1Q9NWS8 449 aa21.54■■□□□ 1.04
PRAF2-202ENST00000553851 CLDN5O00501 218 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 TRIM66O15016 1216 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 LAMTOR5O43504 91 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 SP9P0CG40 484 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 KRT13P13646 458 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 P4HA1P13674 534 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 PSMC2P35998 433 aaKnown RBP21.53■■□□□ 1.04
PRAF2-202ENST00000553851 RPS9P46781 194 aaKnown RBP21.53■■□□□ 1.04
PRAF2-202ENST00000553851 SOX9P48436 509 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 ZCWPW2Q504Y3 356 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 MAML2Q8IZL2 1156 aaPredicted RBP21.53■■□□□ 1.04
PRAF2-202ENST00000553851 TAF4BQ92750 862 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 C8orf48Q96LL4 319 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 B3GNT5Q9BYG0 378 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 SDCBP2Q9H190 292 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 TRPC7Q9HCX4 862 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 GKN1Q9NS71 199 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 GTSE1Q9NYZ3 720 aa21.53■■□□□ 1.04
PRAF2-202ENST00000553851 DENND4CQ5VZ89 1909 aa21.52■■□□□ 1.04
PRAF2-202ENST00000553851 VPS13AQ96RL7 3174 aa21.52■■□□□ 1.04
PRAF2-202ENST00000553851 F8VP50 259 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 HLA-DRAP01903 254 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 TRIM49P0CI25 452 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 TRIM49CP0CI26 452 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 PIK3CAP42336 1068 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 GCLMP48507 274 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 USP46P62068 366 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 TNK2Q07912 1038 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 DENND5BQ6ZUT9 1274 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 ERCC4Q92889 916 aaPredicted RBP21.52■■□□□ 1.03
PRAF2-202ENST00000553851 MSANTD3Q96H12 275 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 GSDMAQ96QA5 445 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 CYP2S1Q96SQ9 504 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 ZNF518BQ9C0D4 1074 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 ELOVL4Q9GZR5 314 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 KIF9Q9HAQ2 790 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 LMAN1LQ9HAT1 526 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 COL4A2P08572 1712 aa21.52■■□□□ 1.03
PRAF2-202ENST00000553851 TRAV19A0A0A6YYK7 116 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 SMC2O95347 1197 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 ASS1P00966 412 aaKnown RBP21.51■■□□□ 1.03
PRAF2-202ENST00000553851 PRCPP42785 496 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 CACNA2D1P54289 1103 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 PPP3CAQ08209 521 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 ZNF268Q14587 947 aaPredicted RBP21.51■■□□□ 1.03
PRAF2-202ENST00000553851 EDRF1Q3B7T1 1238 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 SPOPLQ6IQ16 392 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 ASCL5Q7RTU5 278 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 NKD2Q969F2 451 aaPredicted RBP21.51■■□□□ 1.03
PRAF2-202ENST00000553851 EEF2KMTQ96G04 330 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.51■■□□□ 1.032e-6■■■■■ 196.1
PRAF2-202ENST00000553851 TMEM30AQ9NV96 361 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 PCDHA5Q9Y5H7 936 aa21.51■■□□□ 1.03
PRAF2-202ENST00000553851 PTPRZ1P23471 2315 aaPredicted RBP21.5■■□□□ 1.03
PRAF2-202ENST00000553851 ZNF638Q14966 1978 aaKnown RBP21.5■■□□□ 1.03
PRAF2-202ENST00000553851 SPECC1L-ADORA2AF8WAN1 911 aa21.5■■□□□ 1.03
PRAF2-202ENST00000553851 USP17L7P0C7H9 530 aa21.5■■□□□ 1.03
PRAF2-202ENST00000553851 ENPEPQ07075 957 aa21.5■■□□□ 1.03
PRAF2-202ENST00000553851 ZNF658Q5TYW1 1059 aaPredicted RBP21.5■■□□□ 1.03
PRAF2-202ENST00000553851 C1orf228Q6PIY5 440 aa21.5■■□□□ 1.03
PRAF2-202ENST00000553851 RALGPS2Q86X27 583 aaPredicted RBP21.5■■□□□ 1.03
PRAF2-202ENST00000553851 ARL14EPQ8N8R7 260 aaPredicted RBP21.5■■□□□ 1.03
PRAF2-202ENST00000553851 SMARCE1Q969G3 411 aa21.5■■□□□ 1.03
PRAF2-202ENST00000553851 TNIP3Q96KP6 325 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms