RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 NOC3LQ8WTT2 800 aaKnown RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 CD101Q93033 1021 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 ATP2A3Q93084 1043 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 HPDLQ96IR7 371 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 SPATA17Q96L03 361 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 MTMR12Q9C0I1 747 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 LINC00597Q9H2U6 94 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 INTS13Q9NVM9 706 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 POLR3BQ9NW08 1133 aaPredicted RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 GCNT4Q9P109 453 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 PCDHGA5Q9Y5G8 931 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 WNT6Q9Y6F9 365 aa10.05□□□□□ -0.8
CHD8-203ENST00000553283 MORC2Q9Y6X9 1032 aaPredicted RBP10.05□□□□□ -0.8
CHD8-203ENST00000553283 A0A087X0B3 334 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 C2orf78A6NCI8 922 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 ZNF233A6NK53 670 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 ATP2C2O75185 946 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 TNNC2P02585 160 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 TCF3P15923 654 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 PFKLP17858 780 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 SYT1P21579 422 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 LMO2P25791 158 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 IFNAR2P48551 515 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 PDE6CP51160 858 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 USP4Q13107 963 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 NR1H3Q13133 447 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 SURF1Q15526 300 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 MAPRE1Q15691 268 aaKnown RBP10.04□□□□□ -0.8
CHD8-203ENST00000553283 CCDC6Q16204 474 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 DUOXA2Q1HG44 320 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 EML3Q32P44 896 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 PLK5Q496M5 336 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 LMBRD2Q68DH5 695 aaPredicted RBP10.04□□□□□ -0.8
CHD8-203ENST00000553283 VSTM1Q6UX27 236 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 CCDC65Q8IXS2 484 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 TTC16Q8NEE8 873 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 OR5B17Q8NGF7 314 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 RPLP0P6Q8NHW5 317 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 CCDC26Q8TAB7 109 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 SH3RF2Q8TEC5 729 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 KBTBD7Q8WVZ9 684 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 EZH1Q92800 747 aaPredicted RBP10.04□□□□□ -0.8
CHD8-203ENST00000553283 ACDQ96AP0 544 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 ANKRD36BP1Q96IX9 119 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 CEP295NLQ96MC4 621 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 HHIPQ96QV1 700 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 USP28Q96RU2 1077 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 SYT15Q9BQS2 421 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 CRTAC1Q9NQ79 661 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 RXFP3Q9NSD7 469 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 EBF1Q9UH73 591 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 CDH9Q9ULB4 789 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 ARHGAP26Q9UNA1 814 aa10.04□□□□□ -0.8
CHD8-203ENST00000553283 MAP1BP46821 2468 aaKnown RBP10.04□□□□□ -0.8
CHD8-203ENST00000553283 KRT37O76014 449 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 RHOBTB1O94844 696 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 APBB3O95704 486 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 PDGFRBP09619 1106 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 WARSP23381 471 aaKnown RBP10.03□□□□□ -0.8
CHD8-203ENST00000553283 BDNFP23560 247 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 GRIK1P39086 918 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 PSMC1P62191 440 aaKnown RBP10.03□□□□□ -0.8
CHD8-203ENST00000553283 PSMD2Q13200 908 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 DMC1Q14565 340 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 KCNB1Q14721 858 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 STPG1Q5TH74 334 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 STXBP4Q6ZWJ1 553 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 CBWD2Q8IUF1 395 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 PDILTQ8N807 584 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 MYLPFQ96A32 169 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 LRRC27Q9C0I9 530 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 DUSP15Q9H1R2 295 aaPredicted RBP10.03□□□□□ -0.8
CHD8-203ENST00000553283 KIAA1586Q9HCI6 787 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 VPS45Q9NRW7 570 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 TRPM5Q9NZQ8 1165 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 PTPRJQ12913 1337 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 CEP295Q9C0D2 2601 aa10.03□□□□□ -0.8
CHD8-203ENST00000553283 ATG2BQ96BY7 2078 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 ZNF840PA6NDX5 716 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 DCLK1O15075 740 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 NFATC1O95644 943 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 FAM163BP0C2L3 166 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 ANXA13P27216 316 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 HOXD13P35453 343 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 GNL1P36915 607 aaPredicted RBP10.02□□□□□ -0.81
CHD8-203ENST00000553283 MPLP40238 635 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 PPP3CCP48454 512 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 USP46P62068 366 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 ZXDBP98169 803 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 CYP27A1Q02318 531 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 ELF2Q15723 593 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 N4BP2L1Q5TBK1 243 aaPredicted RBP10.02□□□□□ -0.81
CHD8-203ENST00000553283 DENND5BQ6ZUT9 1274 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 TRAPPC11Q7Z392 1133 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 WDR49Q8IV35 697 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 KIAA1958Q8N8K9 716 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 GLIS3Q8NEA6 775 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 MYCBPAPQ8TBZ2 947 aa10.02□□□□□ -0.81
CHD8-203ENST00000553283 USP33Q8TEY7 942 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms