RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 DNAJB7Q7Z6W7 309 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 RNF135Q8IUD6 432 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 CREBRFQ8IUR6 639 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 HS6ST3Q8IZP7 471 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 FUKQ8N0W3 1084 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 PPM1KQ8N3J5 372 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 ITFG1Q8TB96 612 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 SHKBP1Q8TBC3 707 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 FGF13Q92913 245 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 GCNAQ96QF7 691 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 FUCA2Q9BTY2 467 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 NDST4Q9H3R1 872 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 ZNF334Q9HCZ1 680 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 DMAP1Q9NPF5 467 aaPredicted RBP12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 KRT82Q9NSB4 513 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 GDE1Q9NZC3 331 aa12.45□□□□□ -0.42
TRAFD1-209ENST00000552896 SYCE3A1L190 88 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 F8VP50 259 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 MYL4P12829 197 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 LAMP2P13473 410 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 CCDC130P13994 396 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 HMGA1P17096 107 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 CDC25CP30307 473 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 GRIK1P39086 918 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 LRMPQ12912 555 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 TAF12Q16514 161 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 DDR2Q16832 855 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 EXOC3L4Q17RC7 722 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 VWA3BQ502W6 1294 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 GAREM2Q75VX8 874 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 MTSS1LQ765P7 747 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 ARHGEF19Q8IW93 802 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 SCN4BQ8IWT1 228 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 AOPEPQ8N6M6 819 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 EHBP1Q8NDI1 1231 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 SLC2A14Q8TDB8 520 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 GPR152Q8TDT2 470 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 GIPC2Q8TF65 315 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 ING5Q8WYH8 240 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 JAKMIP2Q96AA8 810 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 TCEAL4Q96EI5 215 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 C8orf48Q96LL4 319 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 FAM81BQ96LP2 452 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 MYRFLQ96LU7 910 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 HNRNPABQ99729 332 aaKnown RBP12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 MED10Q9BTT4 135 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 FAM49BQ9NUQ9 324 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 TMEM30AQ9NV96 361 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 EHD2Q9NZN4 543 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 IGSF9Q9P2J2 1179 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 UXTQ9UBK9 157 aaPredicted RBP12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 TECTAO75443 2155 aa12.44□□□□□ -0.42
TRAFD1-209ENST00000552896 SLC38A8A6NNN8 435 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 ANHXE9PGG2 379 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 CLDN5O00501 218 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 DLL1O00548 723 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 NRG2O14511 850 aaPredicted RBP12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 MOSPD3O75425 235 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 AP1G2O75843 785 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 TPM2P07951 284 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 ZNF18P17022 549 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 GABRR2P28476 465 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 CACNA2D1P54289 1103 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 RAD23BP54727 409 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 HTR4Q13639 388 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 NCAPHQ15003 741 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 KRT31Q15323 416 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 PTPN21Q16825 1174 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 SDHAF4Q5VUM1 108 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 SMYD5Q6GMV2 418 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 PAQR9Q6ZVX9 377 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 ENOSF1Q7L5Y1 443 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 C12orf29Q8N999 325 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 SLC4A11Q8NBS3 891 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 STKLD1Q8NE28 680 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 ANKRD20A12PQ8NF67 263 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 TMEM176AQ96HP8 235 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 CRACR2AQ9BSW2 395 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 TTLL2Q9BWV7 592 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 GPR88Q9GZN0 384 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 IL21Q9HBE4 155 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 CSNK1G1Q9HCP0 422 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 FANCLQ9NW38 375 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 APEX2Q9UBZ4 518 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 MUTYHQ9UIF7 546 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 ZMYM5Q9UJ78 669 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 SORCS3Q9UPU3 1222 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 MIA3Q5JRA6 1907 aa12.43□□□□□ -0.42
TRAFD1-209ENST00000552896 A0A1W2PRU2 124 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 DCXO43602 365 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 TADA3O75528 432 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 PAEPP09466 180 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 FAM200BP0CF97 657 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 ACO1P21399 889 aaKnown RBP12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 PON1P27169 355 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 MTMR3Q13615 1198 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 TEAD2Q15562 447 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
TRAFD1-209ENST00000552896 ZNF394Q53GI3 561 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms