RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 RHOT1Q8IXI2 618 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 FAM126BQ8IXS8 530 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 RCOR2Q8IZ40 523 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 SCML4Q8N228 414 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 APPL2Q8NEU8 664 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 CMASQ8NFW8 434 aaPredicted RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 FAM71BQ8TC56 605 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 KCTD13Q8WZ19 329 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 KRT35Q92764 455 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 TNIP3Q96KP6 325 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 HEXIM2Q96MH2 286 aaKnown RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 MRPL45Q9BRJ2 306 aaKnown RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 LRRC1Q9BTT6 524 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 FAM129AQ9BZQ8 928 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 GOLPH3Q9H4A6 298 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ARFGAP3Q9NP61 516 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ZNF446Q9NWS9 450 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 STIM2Q9P246 746 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 KANSL3Q9P2N6 904 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 PARP2Q9UGN5 583 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 DMGDHQ9UI17 866 aaKnown RBP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.37□□□□□ -0.75
TMEM116-216ENST00000552800 SNX9Q9Y5X1 595 aa10.37□□□□□ -0.75
TMEM116-216ENST00000552800 ARHGEF37A1IGU5 675 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 FAM187AA6NFU0 413 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 ZNF487B1APH4 448 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CEP104O60308 925 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 MGEA5O60502 916 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CXCL10P02778 98 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 GLI1P08151 1106 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 KRT3P12035 628 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CD52P31358 61 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CHRNA3P32297 505 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 ACADSBP45954 432 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 PLA2G4AP47712 749 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 VSNL1P62760 191 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 DSC1Q08554 894 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 ZNF252P-AS1Q0IIN9 211 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 GRIK3Q13003 919 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 PAK2Q13177 524 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CBLBQ13191 982 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 PDCLQ13371 301 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 NNTQ13423 1086 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 DHX34Q14147 1143 aaKnown RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 MBTPS1Q14703 1052 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 PLEKHG4Q58EX7 1191 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 FAM47CQ5HY64 1035 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 PPP1R26Q5T8A7 1209 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 DCLRE1AQ6PJP8 1040 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 TMCO3Q6UWJ1 677 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 BNIPLQ7Z465 357 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 SLC13A5Q86YT5 568 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 IFT20Q8IY31 132 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 ZDHHC14Q8IZN3 488 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CCDC26Q8TAB7 109 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CENPIQ92674 756 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CAVIN3Q969G5 261 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CAPZA3Q96KX2 299 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 CPXM1Q96SM3 734 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 C11orf70Q9BRQ4 267 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 C11orf84Q9BUA3 381 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 FUT8Q9BYC5 575 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 OSBPL7Q9BZF2 842 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 STARD7Q9NQZ5 370 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 TRMT13Q9NUP7 481 aaKnown RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 TMEM51Q9NW97 253 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 HMGXB4Q9UGU5 601 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 TSPAN16Q9UKR8 245 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 PTCH2Q9Y6C5 1203 aa10.36□□□□□ -0.75
TMEM116-216ENST00000552800 V9GYY5 206 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 COL4A4P53420 1690 aaPredicted RBP10.36□□□□□ -0.75
TMEM116-216ENST00000552800 TTC3P53804 2025 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 C2CD4BA6NLJ0 364 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 PODXLO00592 558 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 HUS1O60921 280 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 FGGP02679 453 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 FGFR1P11362 822 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 SELPP16109 830 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 TYMPP19971 482 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 YY1P25490 414 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 RFC1P35251 1148 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 RAP1GAPP47736 663 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 FNTAP49354 379 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 ZNF143P52747 638 aaPredicted RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 RPL7AP62424 266 aaKnown RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 NFX1Q12986 1120 aaKnown RBP10.35□□□□□ -0.75
TMEM116-216ENST00000552800 TUSC3Q13454 348 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 BFSP2Q13515 415 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 MAP9Q49MG5 647 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 ZNF394Q53GI3 561 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 SPDYCQ5MJ68 293 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 FAM171BQ6P995 826 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 EMBQ6PCB8 327 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 PAQR9Q6ZVX9 377 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 BEND5Q7L4P6 421 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 TTC30AQ86WT1 665 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 MREGQ8N565 214 aa10.35□□□□□ -0.75
TMEM116-216ENST00000552800 ARFGAP1Q8N6T3 406 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms