RNA–Protein interactions for RNA: ENST00000552794.1

PPHLN1-222, Transcript of periphilin 1, human

TSL 4

Gene PPHLN1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPHLN1-222	ENST00000552794	ATIC	P31939	592 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	GNL1	P36915	607 aa	Predicted RBP	21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	GRIK1	P39086	918 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	KRT85	P78386	507 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	PSMD2	Q13200	908 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	RUNX3	Q13761	415 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	KCNB1	Q14721	858 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	PON2	Q15165	354 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	WDR72	Q3MJ13	1102 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	TXNDC11	Q6PKC3	985 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	STKLD1	Q8NE28	680 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	OR6B3	Q8NGW1	331 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	MYCBPAP	Q8TBZ2	947 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	CCDC47	Q96A33	483 aa	Known RBP	21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	SPATA17	Q96L03	361 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	FAM83C	Q9BQN1	747 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	GMEB2	Q9UKD1	530 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	CCL26	Q9Y258	94 aa		21.32	■■□□□ 1
PPHLN1-222	ENST00000552794	HCRT	O43612	131 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	ATP2C2	O75185	946 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	PAPSS2	O95340	614 aa	Predicted RBP	21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	STAU1	O95793	577 aa	Known RBP	21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	PDGFRB	P09619	1106 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	LMO2	P25791	158 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	GRSF1	Q12849	480 aa	Known RBP eCLIP	21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	BIRC3	Q13489	604 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	PKP1	Q13835	747 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	SCARA3	Q6AZY7	606 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	DENND5B	Q6ZUT9	1274 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	CPA6	Q8N4T0	437 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	PCED1B	Q96HM7	432 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	SPATA32	Q96LK8	384 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	CRTAC1	Q9NQ79	661 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	RBM12	Q9NTZ6	932 aa	Known RBP	21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	SERTAD1	Q9UHV2	236 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	ATP6V1D	Q9Y5K8	247 aa		21.31	■■□□□ 1
PPHLN1-222	ENST00000552794	ZNF638	Q14966	1978 aa	Known RBP	21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	DENND4C	Q5VZ89	1909 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	TADA3	O75528	432 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	KIF20A	O95235	890 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	PFKL	P17858	780 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	BDNF	P23560	247 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	SATB1	Q01826	763 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	CCIN	Q13939	588 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	MTF1	Q14872	753 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	CCDC142	Q17RM4	750 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	ELOVL4	Q9GZR5	314 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	EBF3	Q9H4W6	596 aa		21.3	■■□□□ 1
PPHLN1-222	ENST00000552794	ACTN4	O43707	911 aa	Known RBP	21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	CST3	P01034	146 aa	Predicted RBP	21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	TDGF1	P13385	188 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	CMA1	P23946	247 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	CNR2	P34972	360 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	PPP3CC	P48454	512 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	IFNAR2	P48551	515 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	MDH1B	Q5I0G3	518 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794		Q6ZS52	159 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	GRAMD1C	Q8IYS0	662 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	ATP2A3	Q93084	1043 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	PAGE5	Q96GU1	130 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	MRPL45	Q9BRJ2	306 aa	Known RBP	21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	TRPM5	Q9NZQ8	1165 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	NXF1	Q9UBU9	619 aa	Known RBP	21.29	■■□□□ 1
PPHLN1-222	ENST00000552794	ATP8B3	O60423	1300 aa		21.29	■■□□□ 1
PPHLN1-222	ENST00000552794		A8MXQ7	604 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	ATG13	O75143	517 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	PFKFB1	P16118	471 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	SDHB	P21912	280 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	NR1H3	Q13133	447 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	GAS6	Q14393	721 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	TMEM196	Q5HYL7	178 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	SLC9A9	Q8IVB4	645 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	DCLK2	Q8N568	766 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	TTC16	Q8NEE8	873 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	VRTN	Q9H8Y1	702 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	HPS4	Q9NQG7	708 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	DUS2	Q9NX74	493 aa	Known RBP	21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	OBSL1	O75147	1896 aa		21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	KIF26A	Q9ULI4	1882 aa	Predicted RBP	21.28	■■□□□ 1
PPHLN1-222	ENST00000552794	PDXK	O00764	312 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	TRDMT1	O14717	391 aa	Known RBP	21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	P4HA1	P13674	534 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	PTPN1	P18031	435 aa	Known RBP	21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	HDC	P19113	662 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	TRIM21	P19474	475 aa	Known RBP	21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	MYL6	P60660	151 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	STK4	Q13043	487 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	USP4	Q13107	963 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	PUM1	Q14671	1186 aa	Known RBP eCLIP	21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	ZNF77	Q15935	545 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	ZNF699	Q32M78	642 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	KMT5B	Q4FZB7	885 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	ZNF667	Q5HYK9	610 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	TRIM68	Q6AZZ1	485 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	LAIR1	Q6GTX8	287 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	LONP2	Q86WA8	852 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	OSCP1	Q8WVF1	389 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	CCDC34	Q96HJ3	373 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	TNIP3	Q96KP6	325 aa		21.27	■■□□□ 1
PPHLN1-222	ENST00000552794	C8orf48	Q96LL4	319 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms