RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 CPSF3Q9UKF6 684 aaKnown RBP9.15□□□□□ -0.94
CDK4-213ENST00000552713 MMP17Q9ULZ9 603 aa9.15□□□□□ -0.94
CDK4-213ENST00000552713 TMEM131Q92545 1883 aa9.15□□□□□ -0.95
CDK4-213ENST00000552713 A0A0B4J269 797 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 FAM221BA6H8Z2 402 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 SGK1O00141 431 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 OGTO15294 1046 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 XPOTO43592 962 aaKnown RBP9.14□□□□□ -0.95
CDK4-213ENST00000552713 HCRTO43612 131 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 PRPF40AO75400 957 aaKnown RBP9.14□□□□□ -0.95
CDK4-213ENST00000552713 ITPKAP23677 461 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 CYP2F1P24903 491 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 P2RY2P41231 377 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 SLC6A11P48066 632 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 IFNAR2P48551 515 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 ACOT2P49753 483 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 LIG4P49917 911 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 SMTNP53814 917 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 SLC12A3P55017 1021 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 NCKAP1LP55160 1127 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 LMAN2Q12907 356 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 TMEM132DQ14C87 1099 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 ANKRD1Q15327 319 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 COL28A1Q2UY09 1125 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 KRT79Q5XKE5 535 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 PDZD3Q86UT5 571 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 METTL23Q86XA0 190 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 SYT12Q8IV01 421 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 DEFB119Q8N690 84 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 ALLCQ8N6M5 410 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 SH3RF2Q8TEC5 729 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 C2orf15Q8WU43 125 aaKnown RBP9.14□□□□□ -0.95
CDK4-213ENST00000552713 ATP2A3Q93084 1043 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 C8orf76Q96K31 380 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 FAM84AQ96KN4 292 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 BBC3Q96PG8 261 aaPredicted RBP9.14□□□□□ -0.95
CDK4-213ENST00000552713 IKZF4Q9H2S9 585 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 SLC32A1Q9H598 525 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 PILRBQ9UKJ0 227 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 PCDHB5Q9Y5E4 795 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 NBEAQ8NFP9 2946 aa9.14□□□□□ -0.95
CDK4-213ENST00000552713 KNTC1P50748 2209 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 ANKRD63C9JTQ0 380 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 TNFRSF10BO14763 440 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 SCAMP3O14828 347 aaKnown RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 HNRNPDLO14979 420 aaKnown RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 ADAM23O75077 832 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 NOL4O94818 638 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 KLF8O95600 359 aaPredicted RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 PIGRP01833 764 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 USP17L7P0C7H9 530 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 CSH1P0DML2 217 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 CSH2P0DML3 217 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 ACAT1P24752 427 aaKnown RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 TAF6P49848 677 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 WNT7BP56706 349 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 SCAPQ12770 1279 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 MAP7D1Q3KQU3 841 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 SLC23A3Q6PIS1 610 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 LPCAT2Q7L5N7 544 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 RAB44Q7Z6P3 723 aaPredicted RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 C11orf74Q86VG3 221 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 C12orf40Q86WS4 652 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 THEM5Q8N1Q8 247 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 SYT2Q8N9I0 419 aaPredicted RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 IL17RCQ8NAC3 791 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 TXNDC5Q8NBS9 432 aaKnown RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 COL26A1Q96A83 441 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 MYRFLQ96LU7 910 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 CAMK1GQ96NX5 476 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 PKMYT1Q99640 499 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 MSTO1Q9BUK6 570 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 TIPINQ9BVW5 301 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 NUSAP1Q9BXS6 441 aaKnown RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 CCSER1Q9C0I3 900 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 DPP3Q9NY33 737 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 DSEQ9UL01 958 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.13□□□□□ -0.95
CDK4-213ENST00000552713 NUMA1Q14980 2115 aa9.13□□□□□ -0.95
CDK4-213ENST00000552713 TP53BP1Q12888 1972 aaPredicted RBP9.12□□□□□ -0.95
CDK4-213ENST00000552713 TRAV19A0A0A6YYK7 116 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 KPNA7A9QM74 516 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 UPK3BL1B0FP48 263 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 UPK3BL2E5RIL1 263 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 CYP17A1P05093 508 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 CFIP05156 583 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 CKMP06732 381 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 PLA2G4BP0C869 781 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 CD59P13987 128 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 TRAPPC10P48553 1259 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 SMARCB1Q12824 385 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 KYAT1Q16773 422 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 HYIQ5T013 277 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 PEAR1Q5VY43 1037 aaPredicted RBP9.12□□□□□ -0.95
CDK4-213ENST00000552713 LYSMD4Q5XG99 296 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 CRELD2Q6UXH1 353 aaPredicted RBP9.12□□□□□ -0.95
CDK4-213ENST00000552713 OSTM1Q86WC4 334 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 CCDC83Q8IWF9 413 aa9.12□□□□□ -0.95
CDK4-213ENST00000552713 DCP1BQ8IZD4 617 aaKnown RBP9.12□□□□□ -0.95
CDK4-213ENST00000552713 PDCL2Q8N4E4 241 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms