RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 FHL3Q13643 280 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 ATP1A4Q13733 1029 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 IQCB1Q15051 598 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 NOMO2Q5JPE7 1267 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 MAP3K21Q5TCX8 1036 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 MCTP2Q6DN12 878 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 DRICH1Q6PGQ1 229 aaPredicted RBP4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 SPOCD1Q6ZMY3 1216 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 BRINP3Q76B58 766 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 ZNF280BQ86YH2 543 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 GPR135Q8IZ08 494 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 CFAP52Q8N1V2 620 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 ZFP28Q8NHY6 868 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 TBC1D15Q8TC07 691 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 CENPIQ92674 756 aaPredicted RBP4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 ERP27Q96DN0 273 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 LRIG1Q96JA1 1093 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 SLC46A1Q96NT5 459 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 MOGAT1Q96PD6 335 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 TWNKQ96RR1 684 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 TCF25Q9BQ70 676 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 TLR10Q9BXR5 811 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 SLC46A2Q9BY10 475 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 AGXT2Q9BYV1 514 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 NELFAQ9H3P2 528 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 G6PC2Q9NQR9 355 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 FAM53CQ9NYF3 392 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 ZDHHC9Q9Y397 364 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 NR2E1Q9Y466 385 aa4.66□□□□□ -1.66
LSM6P2-201ENST00000552208 DRGXA6NNA5 263 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 CYP1A1P04798 512 aaPredicted RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 FCER1AP12319 257 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 BCAT1P54687 386 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 ALDH18A1P54886 795 aaKnown RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 MAPK7Q13164 816 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 PDE1CQ14123 709 aaPredicted RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 DLGAP5Q15398 846 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 SURF1Q15526 300 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 TTC22Q5TAA0 569 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 ANKRD45Q5TZF3 282 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 METRNLQ641Q3 311 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 ABLIM2Q6H8Q1 611 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 NEK10Q6ZWH5 1172 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 RALYLQ86SE5 291 aaKnown RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 NGDNQ8NEJ9 315 aaKnown RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 CSGALNACT1Q8TDX6 532 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 NUP133Q8WUM0 1156 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 AFG1LQ8WV93 481 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 RFFLQ8WZ73 363 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 TFAP2CQ92754 450 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 RRP36Q96EU6 259 aaKnown RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 ZNF512Q96ME7 567 aaPredicted RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 TRAPPC9Q96Q05 1148 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 TRIM5Q9C035 493 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 RNPEPQ9H4A4 650 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 TAF1DQ9H5J8 278 aaPredicted RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 MSL2Q9HCI7 577 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 SEPSECSQ9HD40 501 aaKnown RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 ZSCAN32Q9NX65 697 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 POLG2Q9UHN1 485 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 VPS51Q9UID3 782 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 HPSEQ9Y251 543 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 RABGAP1Q9Y3P9 1069 aa4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.65□□□□□ -1.67
LSM6P2-201ENST00000552208 A0A087X0M5 115 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 A0A1B0GX30 115 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 K7ENM7 598 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 FFAR3O14843 346 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 ZNF500O60304 480 aaPredicted RBP4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 ITGB1P05556 798 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 CNPP09543 421 aaKnown RBP4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 ATXN1LP0C7T5 689 aaKnown RBP4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 KCNA3P22001 575 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 GCSHP23434 173 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 KLRK1P26718 216 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 AARSP49588 968 aaKnown RBP eCLIP4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 CDK7P50613 346 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 DGKEP52429 567 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 ZNF134P52741 427 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 PRKG2Q13237 762 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 SSPNQ14714 243 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 GRM4Q14833 912 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 TOMM20Q15388 145 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 SMAD1Q15797 465 aaKnown RBP4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 MGAT5BQ3V5L5 792 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 NRN1LQ496H8 165 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 ATPAF1Q5TC12 328 aaPredicted RBP4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 SPATA1Q5VX52 437 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 NFRKBQ6P4R8 1299 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 FAM111BQ6SJ93 734 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 DSTYKQ6XUX3 929 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 C4orf50Q6ZRC1 276 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 TMPRSS9Q7Z410 1059 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 RASGRP3Q8IV61 690 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 NRSN1Q8IZ57 195 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 CARFQ8N187 725 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 PDILTQ8N807 584 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 SHCBP1Q8NEM2 672 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 OR52N2Q8NGI0 321 aa4.64□□□□□ -1.67
LSM6P2-201ENST00000552208 POC1BQ8TC44 478 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms