RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 ATF7P17544 494 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 COPB2P35606 906 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 BTDP43251 543 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 ABCG1P45844 678 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 AVPR1BP47901 424 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 ZNF81P51508 661 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 GPR85P60893 370 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 WDR5P61964 334 aaKnown RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 GNAI1P63096 354 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 ADAM8P78325 824 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 HTRA4P83105 476 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 SHC2P98077 582 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 CALD1Q05682 793 aaKnown RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 COG2Q14746 738 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 PTPROQ16827 1216 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 NSMFQ6X4W1 530 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 CXorf67Q86X51 503 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 MDGA1Q8NFP4 955 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 CPT1CQ8TCG5 803 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 SLC7A6OSQ96CW6 309 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 MYEOVQ96EZ4 313 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 SGSM3Q96HU1 749 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 EXOC2Q96KP1 924 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 RPL10LQ96L21 214 aaKnown RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 RAD9AQ99638 391 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 TCF25Q9BQ70 676 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 WDR11Q9BZH6 1224 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 ALDH8A1Q9H2A2 487 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 ABHD16BQ9H3Z7 469 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 SMURF1Q9HCE7 757 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 HOXC10Q9NYD6 342 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 DENND2AQ9ULE3 1009 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 SRPK3Q9UPE1 567 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 CNPY2Q9Y2B0 182 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 VWA7Q9Y334 891 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 MSRB2Q9Y3D2 182 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 Q9Y3F1 56 aa2.79□□□□□ -1.96
PTCH1-223ENST00000551623 EPN1Q9Y6I3 576 aaPredicted RBP2.79□□□□□ -1.96
PTCH1-223ENST00000551623 MYO9BQ13459 2157 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 FRYLO94915 3013 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 TANC1Q9C0D5 1861 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ASTN1O14525 1302 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 UBE2QL1A1L167 161 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 FAM47E-STBD1D6RA91 191 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 PLIN1O60240 522 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 TBX10O75333 385 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 RBMXL2O75526 392 aaKnown RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ALDH1L1O75891 902 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 RECQL4O94761 1208 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 IPO13O94829 963 aaKnown RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 C4BPAP04003 597 aaKnown RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 IQCF3P0C7M6 154 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 LINC00271P0C7V0 271 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 PYGMP11217 842 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 TCF3P15923 654 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 CXCR5P32302 372 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 CLCN5P51795 746 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 CCL23P55773 120 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 JAM2P57087 298 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 MECOMQ03112 1051 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ARID5AQ03989 594 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 COASYQ13057 564 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ITGA7Q13683 1181 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 HSP90AA2PQ14568 343 aaPredicted RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 GPNMBQ14956 572 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 PTPN21Q16825 1174 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 SHROOM1Q2M3G4 852 aaPredicted RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 LRRC24Q50LG9 513 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 TAF7LQ5H9L4 462 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 FAM209AQ5JX71 171 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 METTL24Q5JXM2 366 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 CCDC62Q6P9F0 684 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 KLHDC10Q6PID8 442 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 G2E3Q7L622 706 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 PTRH1Q86Y79 214 aaKnown RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 IFNL3Q8IZI9 196 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 BCL6BQ8N143 479 aaPredicted RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 LCORLQ8N3X6 602 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 TSPYL6Q8N831 410 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 TMEM105Q8N8V8 129 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ANKRD53Q8N9V6 530 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 REPS2Q8NFH8 660 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 PCDH19Q8TAB3 1148 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 SUSD6Q92537 303 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 SCLYQ96I15 445 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 COQ10AQ96MF6 247 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 RIPOR3Q96MK2 946 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ZNF778Q96MU6 729 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 STK31Q9BXU1 1019 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 LMAN2LQ9H0V9 348 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ZNF768Q9H5H4 540 aaKnown RBP2.78□□□□□ -1.96
PTCH1-223ENST00000551623 CERS4Q9HA82 394 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 SPC25Q9HBM1 224 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 UCKL1Q9NWZ5 548 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 ANKFY1Q9P2R3 1169 aa2.78□□□□□ -1.96
PTCH1-223ENST00000551623 CDK5RAP2Q96SN8 1893 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 SIP14410 1827 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 FLT1P17948 1338 aa2.77□□□□□ -1.97
PTCH1-223ENST00000551623 ITPR1Q14643 2758 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms