RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 DCAF8L1A6NGE4 600 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 TMEM88BA6NKF7 163 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 KPNA7A9QM74 516 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 M0QZ92 97 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 DPYSL4O14531 572 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 TP73O15350 636 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 LIASO43766 372 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 GABBR2O75899 941 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 GAS8O95995 478 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 CTSHP09668 335 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 RARBP10826 455 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 CCND3P30281 292 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-208ENST00000551338 LRPAP1P30533 357 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 PNPLA4P41247 253 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 LMAN1P49257 510 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 PMS2P54278 862 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 CACNB2Q08289 660 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-208ENST00000551338 TAZQ16635 292 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 HADHQ16836 314 aaKnown RBP12.11□□□□□ -0.47
RAB5C-208ENST00000551338 SV2CQ496J9 727 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 TFDP3Q5H9I0 405 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 ZFYVE27Q5T4F4 411 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 UBAP2Q5T6F2 1119 aaKnown RBP12.11□□□□□ -0.47
RAB5C-208ENST00000551338 KAZNQ674X7 775 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 TWF2Q6IBS0 349 aaKnown RBP12.11□□□□□ -0.47
RAB5C-208ENST00000551338 OR6B2Q6IFH4 312 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 SERINC5Q86VE9 423 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 SESTD1Q86VW0 696 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 KLHDC9Q8NEP7 349 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 OR6B3Q8NGW1 331 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 ATL2Q8NHH9 583 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 CCDC114Q96M63 670 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 PPP1R10Q96QC0 940 aaKnown RBP12.11□□□□□ -0.47
RAB5C-208ENST00000551338 PEBP4Q96S96 227 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 SENP6Q9GZR1 1112 aaPredicted RBP12.11□□□□□ -0.47
RAB5C-208ENST00000551338 ZWILCHQ9H900 591 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 AAASQ9NRG9 546 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 ASIC3Q9UHC3 531 aa12.11□□□□□ -0.47
RAB5C-208ENST00000551338 C2CD4BA6NLJ0 364 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 MEIS3P2A8K0S8 358 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 A8MXQ7 604 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 PIK3R2O00459 728 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 KIF3CO14782 793 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 RPS6KA5O75582 802 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 TRUB2O95900 331 aaKnown RBP12.1□□□□□ -0.47
RAB5C-208ENST00000551338 ALDH1A1P00352 501 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 CHRNA1P02708 482 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 KRT7P08729 469 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 NUDT17P0C025 328 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 CCDC130P13994 396 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 KLRC2P26717 231 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 MIPP30301 263 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 SKOR1P84550 965 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 PDE4CQ08493 712 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 ACAP1Q15027 740 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-208ENST00000551338 SMTNL2Q2TAL5 461 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 RAB6CQ53S08 254 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 FAM47CQ5HY64 1035 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 ZNF618Q5T7W0 954 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 AGBL2Q5U5Z8 902 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 CCSAPQ6IQ19 270 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-208ENST00000551338 PMF1Q6P1K2 205 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 DRICH1Q6PGQ1 229 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-208ENST00000551338 OLFML1Q6UWY5 402 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 PAXIP1Q6ZW49 1069 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-208ENST00000551338 CYP4V2Q6ZWL3 525 aaPredicted RBP12.1□□□□□ -0.47
RAB5C-208ENST00000551338 RPAINQ86UA6 219 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 CRYBG2Q8N1P7 616 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 SLC35F5Q8WV83 523 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 RXFP2Q8WXD0 754 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 SNF8Q96H20 258 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 ATP6V1G3Q96LB4 118 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 MIS12Q9H081 205 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 RAB6CQ9H0N0 254 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 SPC25Q9HBM1 224 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 LRRC4CQ9HCJ2 640 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 XPNPEP3Q9NQH7 507 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 FAM105AQ9NUU6 356 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 MYO16Q9Y6X6 1858 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 GRIN2DO15399 1336 aa12.1□□□□□ -0.47
RAB5C-208ENST00000551338 PAPSS1O43252 624 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-208ENST00000551338 AOC2O75106 756 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 TJP3O95049 919 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 ASGR1P07306 291 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 ATF2P15336 505 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 WARSP23381 471 aaKnown RBP12.09□□□□□ -0.47
RAB5C-208ENST00000551338 KDELR1P24390 212 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 CST5P28325 142 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-208ENST00000551338 ADORA2BP29275 332 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 PCK1P35558 622 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 ZNF143P52747 638 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-208ENST00000551338 ITGA8P53708 1063 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 CALCOCO2Q13137 446 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 TAF5Q15542 800 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 OASLQ15646 514 aaKnown RBP12.09□□□□□ -0.47
RAB5C-208ENST00000551338 C15orf59Q2T9L4 293 aaPredicted RBP12.09□□□□□ -0.47
RAB5C-208ENST00000551338 KCTD16Q68DU8 428 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 BBS12Q6ZW61 710 aa12.09□□□□□ -0.47
RAB5C-208ENST00000551338 TMEM110Q86TL2 294 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms