RNA–Protein interactions for RNA: ENST00000550771.5

CACNB3-218, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 586 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-218ENST00000550771 ATP2A3Q93084 1043 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 SPATA17Q96L03 361 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 CNTNAP3BQ96NU0 1288 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 SLC22A12Q96S37 553 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 CYP2S1Q96SQ9 504 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 SYT15Q9BQS2 421 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 CNTNAP3Q9BZ76 1288 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 KIAA1586Q9HCI6 787 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 MAGEC2Q9UBF1 373 aaPredicted RBP22.12■■□□□ 1.13
CACNB3-218ENST00000550771 SPTBN2O15020 2390 aa22.12■■□□□ 1.13
CACNB3-218ENST00000550771 PTPRJQ12913 1337 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 PFKLP17858 780 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 IFNAR2P48551 515 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 PXNP49023 591 aaPredicted RBP22.11■■□□□ 1.13
CACNB3-218ENST00000550771 PDE6CP51160 858 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 LMBRD2Q68DH5 695 aaPredicted RBP22.11■■□□□ 1.13
CACNB3-218ENST00000550771 CBWD2Q8IUF1 395 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 WDR49Q8IV35 697 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 DDX1Q92499 740 aaKnown RBP22.11■■□□□ 1.13
CACNB3-218ENST00000550771 CD101Q93033 1021 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 KBTBD4Q9NVX7 518 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 ARHGAP26Q9UNA1 814 aa22.11■■□□□ 1.13
CACNB3-218ENST00000550771 AXIN1O15169 862 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 EIF3DO15371 548 aaKnown RBP eCLIP22.1■■□□□ 1.13
CACNB3-218ENST00000550771 GDF9O60383 454 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 OBSL1O75147 1896 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 ATP2C2O75185 946 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 EPN2O95208 641 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 ZNF806P0C7X5 589 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 CCDC192P0DO97 292 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 WARSP23381 471 aaKnown RBP22.1■■□□□ 1.13
CACNB3-218ENST00000550771 LMO2P25791 158 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 LIMK1P53667 647 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 KCNB1Q14721 858 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 EML3Q32P44 896 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 PPM1JQ5JR12 505 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 SYT13Q7L8C5 426 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 KBTBD6Q86V97 674 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 ARL14EPQ8N8R7 260 aaPredicted RBP22.1■■□□□ 1.13
CACNB3-218ENST00000550771 LINC00301Q8NCQ3 95 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 GLIS3Q8NEA6 775 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 MYLPFQ96A32 169 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 ZC3H10Q96K80 434 aaKnown RBP22.1■■□□□ 1.13
CACNB3-218ENST00000550771 TRIM9Q9C026 710 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 ARRDC1-AS1Q9H2J1 176 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 CUEDC2Q9H467 287 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 HSPBP1Q9NZL4 362 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 PCDHGA5Q9Y5G8 931 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 WNT6Q9Y6F9 365 aa22.1■■□□□ 1.13
CACNB3-218ENST00000550771 C2orf78A6NCI8 922 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 HDCP19113 662 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 HOXD13P35453 343 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 PSMC1P62191 440 aaKnown RBP22.09■■□□□ 1.13
CACNB3-218ENST00000550771 AMPD3Q01432 767 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 NR1H3Q13133 447 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 STK38Q15208 465 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 E2F4Q16254 413 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 NAIF1Q69YI7 327 aaPredicted RBP22.09■■□□□ 1.13
CACNB3-218ENST00000550771 CCDC26Q8TAB7 109 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 SH3RF2Q8TEC5 729 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 HPS3Q969F9 1004 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 CRTAC1Q9NQ79 661 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 EHD2Q9NZN4 543 aa22.09■■□□□ 1.13
CACNB3-218ENST00000550771 STX6O43752 255 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 PPP6R2O75170 966 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 FAM163BP0C2L3 166 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 BDNFP23560 247 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 GRIK1P39086 918 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 AASDHQ4L235 1098 aaPredicted RBP22.08■■□□□ 1.13
CACNB3-218ENST00000550771 CNNM4Q6P4Q7 775 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 DENND5BQ6ZUT9 1274 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 TRAPPC11Q7Z392 1133 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 KIAA1958Q8N8K9 716 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 C12orf50Q8NA57 414 aaPredicted RBP22.08■■□□□ 1.13
CACNB3-218ENST00000550771 RPLP0P6Q8NHW5 317 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 MYCBPAPQ8TBZ2 947 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 ZNF507Q8TCN5 953 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 EZH1Q92800 747 aaPredicted RBP22.08■■□□□ 1.13
CACNB3-218ENST00000550771 ACDQ96AP0 544 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 PCED1BQ96HM7 432 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 HHIPQ96QV1 700 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 EBF1Q9UH73 591 aa22.08■■□□□ 1.13
CACNB3-218ENST00000550771 ZNF638Q14966 1978 aaKnown RBP22.08■■□□□ 1.12
CACNB3-218ENST00000550771 TRIM66O15016 1216 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 SPTLC2O15270 562 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 ANXA13P27216 316 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 PPP3CCP48454 512 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 SNRPFP62306 86 aaKnown RBP22.07■■□□□ 1.12
CACNB3-218ENST00000550771 PLA2G2CQ5R387 149 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 IL31Q6EBC2 164 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 EPM2AIP1Q7L775 607 aaPredicted RBP22.07■■□□□ 1.12
CACNB3-218ENST00000550771 TTC16Q8NEE8 873 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 MMS19Q96T76 1030 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 TTLL2Q9BWV7 592 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 POLR3BQ9NW08 1133 aaPredicted RBP22.07■■□□□ 1.12
CACNB3-218ENST00000550771 TRPM5Q9NZQ8 1165 aa22.07■■□□□ 1.12
CACNB3-218ENST00000550771 TPRP12270 2363 aaKnown RBP22.06■■□□□ 1.12
CACNB3-218ENST00000550771 TGFB1I1O43294 461 aa22.06■■□□□ 1.12
CACNB3-218ENST00000550771 TACC1O75410 805 aa22.06■■□□□ 1.12
CACNB3-218ENST00000550771 NFATC1O95644 943 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms