RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 DNM1LO00429 736 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 F2P00734 622 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 MMP3P08254 477 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 ADRB1P08588 477 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 C6orf222P0C671 652 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 FGFR1P11362 822 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 PABPC1P11940 636 aaKnown RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 PTMSP20962 102 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 MARCKSP29966 332 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 GTF2F1P35269 517 aaKnown RBP eCLIP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 TCF7P36402 384 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 QARSP47897 775 aaKnown RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 PSMC5P62195 406 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 DLX2Q07687 328 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 HYIQ5T013 277 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 YOD1Q5VVQ6 348 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 RESP18Q5W5W9 173 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 NCAPH2Q6IBW4 605 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 CCSAPQ6IQ19 270 aaPredicted RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 ETV3LQ6ZN32 361 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 SPATC1Q76KD6 591 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 MIER3Q7Z3K6 550 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 MIB1Q86YT6 1006 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 FAM26EQ8N5C1 309 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 KLHDC9Q8NEP7 349 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 FAM167AQ96KS9 214 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 DEFB118Q96PH6 123 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 SYT3Q9BQG1 590 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 EIF2AK1Q9BQI3 630 aaKnown RBP6.38□□□□□ -1.39
SCAF11-213ENST00000550629 KATNAL1Q9BW62 490 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 CCSER1Q9C0I3 900 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 NT5C3AQ9H0P0 336 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 CSRNP2Q9H175 543 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 ADAM7Q9H2U9 754 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 ZSWIM4Q9H7M6 989 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 ERAP1Q9NZ08 941 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 USP25Q9UHP3 1055 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 IGSF9BQ9UPX0 1349 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 DOCK3Q8IZD9 2030 aa6.38□□□□□ -1.39
SCAF11-213ENST00000550629 KBTBD13C9JR72 458 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 DDX39AO00148 427 aaKnown RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 PDPK1O15530 556 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CHMP2AO43633 222 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 SLITRK3O94933 977 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 SGPL1O95470 568 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 PGK1P00558 417 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 LGALS2P05162 132 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CCT6AP40227 531 aaKnown RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 STAT5BP51692 787 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 ACLYP53396 1101 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 SLURP1P55000 103 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 UBE2HP62256 183 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 PURAQ00577 322 aaKnown RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 LRRC41Q15345 812 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 TMEM119Q4V9L6 283 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 XKR3Q5GH77 459 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 TMEM63BQ5T3F8 832 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 GJC2Q5T442 439 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 SWSAP1Q6NVH7 229 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 SHC4Q6S5L8 630 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 LIPIQ6XZB0 460 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CCDC73Q6ZRK6 1079 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 OTUD6AQ7L8S5 288 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 FRMD5Q7Z6J6 570 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CATSPER3Q86XQ3 398 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 C4orf19Q8IY42 314 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 EXOC8Q8IYI6 725 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 IQUBQ8NA54 791 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 U2AF1L4Q8WU68 220 aaKnown RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 MRPS27Q92552 414 aaKnown RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 GLG1Q92896 1179 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 GJA10Q969M2 543 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CALML4Q96GE6 196 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CDK5RAP3Q96JB5 506 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 LXNQ9BS40 222 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 C16orf70Q9BSU1 422 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 MTG1Q9BT17 334 aaPredicted RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 MMTAG2Q9BU76 263 aaKnown RBP6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CDIP1Q9H305 208 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 CUEDC2Q9H467 287 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 MAGEF1Q9HAY2 307 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 ZNF302Q9NR11 478 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 GPR27Q9NS67 375 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 ANKEF1Q9NU02 776 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 HPSEQ9Y251 543 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 MCM3APO60318 1980 aa6.37□□□□□ -1.39
SCAF11-213ENST00000550629 COL1A2P08123 1366 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 TRAV20A0A0B4J274 112 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 BLACEA4D250 179 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 SH3D21A4FU49 640 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 CCDC85CA6NKD9 419 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 PP2D1A8MPX8 630 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 HAS3O00219 553 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 HGSO14964 777 aaPredicted RBP6.36□□□□□ -1.39
SCAF11-213ENST00000550629 ASGR1P07306 291 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 KRTAP10-2P60368 255 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 SP4Q02446 784 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 GRIN1Q05586 938 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 ZNF484Q5JVG2 852 aa6.36□□□□□ -1.39
SCAF11-213ENST00000550629 KCNT2Q6UVM3 1135 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms