RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 MEIS2O14770 477 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 CXCL14O95715 111 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 MMP3P08254 477 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 MAPTP10636 758 aaKnown RBP12.73□□□□□ -0.37
NR4A1-215ENST00000550557 POP1Q99575 1024 aaKnown RBP12.73□□□□□ -0.37
NR4A1-215ENST00000550557 TSSK1BQ9BXA7 367 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 OLFML3Q9NRN5 406 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 USP20Q9Y2K6 914 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 EVX2Q03828 476 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 LRRC43Q8N309 656 aa12.73□□□□□ -0.37
NR4A1-215ENST00000550557 STN1Q9H668 368 aaKnown RBP12.73□□□□□ -0.37
NR4A1-215ENST00000550557 LACTBL1A8MY62 500 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 EIF3HO15372 352 aaKnown RBP eCLIP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 SUN1O94901 812 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 PTGER2P43116 358 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 RAP1GAPP47736 663 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 PDK1Q15118 436 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 NLRP14Q86W24 1093 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 UNC45BQ8IWX7 931 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TRIM42Q8IWZ5 723 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 SENP8Q96LD8 212 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 UROC1Q96N76 676 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 ELOVL4Q9GZR5 314 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 CREBZFQ9NS37 354 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 USP54Q70EL1 1684 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 RTN3O95197 1032 aaPredicted RBP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TKTL1P51854 596 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 LBX1P52954 281 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 GPS1Q13098 491 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 MMEL1Q495T6 779 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TRIM59Q8IWR1 403 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TRIM48Q8IWZ4 208 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 MMGT1Q8N4V1 131 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TBC1D19Q8N5T2 526 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 SKA1Q96BD8 255 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TMEM176AQ96HP8 235 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 VCX3AQ9NNX9 186 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 ASAH2Q9NR71 780 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TFR2Q9UP52 801 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 IQANK1A0A1B0GTG1 560 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 KCNN4O15554 427 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 PSMD3O43242 534 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 LAG3P18627 525 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 PTPN11Q06124 597 aaPredicted RBP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 PKN2Q16513 984 aaKnown RBP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 PCSK7Q16549 785 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 ANKS3Q6ZW76 656 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 RCOR2Q8IZ40 523 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 KIAA0895Q8NCT3 520 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TMEM117Q9H0C3 514 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 DMAP1Q9NPF5 467 aaPredicted RBP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 CISHQ9NSE2 258 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 LRRIQ3A6PVS8 624 aaPredicted RBP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 AP3B1O00203 1094 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 MAPK13O15264 365 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 KRT38O76015 456 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 RHOCP08134 193 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 CCL5P13501 91 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 LAMB3Q13751 1172 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 HSDL1Q3SXM5 330 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 BOLA3Q53S33 107 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 FBXO22Q8NEZ5 403 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 USP13Q92995 863 aaPredicted RBP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 CENPKQ9BS16 269 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 SEZ6LQ9BYH1 1024 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 DRC3Q9H069 523 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 CERS4Q9HA82 394 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 SPG21Q9NZD8 308 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 TBK1Q9UHD2 729 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 PACSIN2Q9UNF0 486 aaPredicted RBP12.72□□□□□ -0.37
NR4A1-215ENST00000550557 LAMB4A4D0S4 1761 aa12.72□□□□□ -0.37
NR4A1-215ENST00000550557 ATP9AO75110 1047 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 MAFO75444 373 aaPredicted RBP12.71□□□□□ -0.37
NR4A1-215ENST00000550557 MAP4P27816 1152 aaKnown RBP12.71□□□□□ -0.37
NR4A1-215ENST00000550557 GALCP54803 685 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 BST2Q10589 180 aaKnown RBP12.71□□□□□ -0.37
NR4A1-215ENST00000550557 SV2AQ7L0J3 742 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 SH3BP5LQ7L8J4 393 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 ADCK2Q7Z695 626 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 PPHLN1Q8NEY8 458 aaKnown RBP12.71□□□□□ -0.37
NR4A1-215ENST00000550557 Q9H521 79 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 RAB21Q9UL25 225 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 SNX24Q9Y343 169 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 HES2Q9Y543 173 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 SETSIPP0DME0 302 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 CASP2P42575 452 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 OXCT1P55809 520 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 LPPQ93052 612 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 SMARCD1Q96GM5 515 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 PNMA5Q96PV4 448 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 DUSP9Q99956 384 aaKnown RBP12.71□□□□□ -0.37
NR4A1-215ENST00000550557 CORO1BQ9BR76 489 aa12.71□□□□□ -0.37
NR4A1-215ENST00000550557 ZWINTO95229 277 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 SESN2P58004 480 aaPredicted RBP12.71□□□□□ -0.38
NR4A1-215ENST00000550557 TLE2Q04725 743 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 POU5F1BQ06416 359 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 PLPP4Q5VZY2 271 aa12.71□□□□□ -0.38
NR4A1-215ENST00000550557 BRSK2Q8IWQ3 736 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms