RNA–Protein interactions for RNA: ENST00000549815.1

GCN1-206, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-206ENST00000549815 SPATA17Q96L03 361 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 FNBP1Q96RU3 617 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 XYLT2Q9H1B5 865 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 GKN1Q9NS71 199 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 TDP1Q9NUW8 608 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 THG1LQ9NWX6 298 aaKnown RBP14.37□□□□□ -0.11
GCN1-206ENST00000549815 GCNT4Q9P109 453 aa14.37□□□□□ -0.11
GCN1-206ENST00000549815 MAGEC2Q9UBF1 373 aaPredicted RBP14.37□□□□□ -0.11
GCN1-206ENST00000549815 R3HCC1Q9Y3T6 440 aaKnown RBP14.37□□□□□ -0.11
GCN1-206ENST00000549815 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.36□□□□□ -0.11
GCN1-206ENST00000549815 FAM237AA0A1B0GTK4 181 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 A0A1B0GVL5 298 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 K7ESF4 209 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 PDGFRBP09619 1106 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 PFKFB1P16118 471 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 CMA1P23946 247 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 CXCL12P48061 93 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 CASP4P49662 377 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 CLDN10P78369 228 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 RUNX3Q13761 415 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 PON2Q15165 354 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 DGKKQ5KSL6 1271 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 TRIM68Q6AZZ1 485 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 VSTM1Q6UX27 236 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 CEP57L1Q8IYX8 460 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 MYCBPAPQ8TBZ2 947 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 PCED1BQ96HM7 432 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 CEP295NLQ96MC4 621 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 SLC22A12Q96S37 553 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 MMS19Q96T76 1030 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 KCTD10Q9H3F6 313 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 VRTNQ9H8Y1 702 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 DMAC2Q9NW81 257 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 C2orf42Q9NWW7 574 aa14.36□□□□□ -0.11
GCN1-206ENST00000549815 HELZP42694 1942 aaKnown RBP14.35□□□□□ -0.11
GCN1-206ENST00000549815 EXOC3O60645 756 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 BDNFP23560 247 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 GNL1P36915 607 aaPredicted RBP14.35□□□□□ -0.11
GCN1-206ENST00000549815 ID4P47928 161 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 MYL6P60660 151 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 USP46P62068 366 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 FAM160A1Q05DH4 1040 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 USP4Q13107 963 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 MAPRE1Q15691 268 aaKnown RBP14.35□□□□□ -0.11
GCN1-206ENST00000549815 ZNF77Q15935 545 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 WDR72Q3MJ13 1102 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 KMT5BQ4FZB7 885 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 SLC9A9Q8IVB4 645 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 KIAA2013Q8IYS2 634 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 PARD3BQ8TEW8 1205 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 CYP2S1Q96SQ9 504 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 DPEP3Q9H4B8 488 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 EBF3Q9H4W6 596 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 SMG5Q9UPR3 1016 aaKnown RBP14.35□□□□□ -0.11
GCN1-206ENST00000549815 CACNA1AO00555 2505 aa14.35□□□□□ -0.11
GCN1-206ENST00000549815 C2orf78A6NCI8 922 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 LRRIQ3A6PVS8 624 aaPredicted RBP14.34□□□□□ -0.11
GCN1-206ENST00000549815 C4BPAP04003 597 aaKnown RBP14.34□□□□□ -0.11
GCN1-206ENST00000549815 ARSAP15289 507 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 TCF3P15923 654 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 HOXC13P31276 330 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 ATICP31939 592 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 CACNA2D1P54289 1103 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 NRLP54845 237 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 CYP27A1Q02318 531 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 DMWDQ09019 674 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 PSMD2Q13200 908 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 PPP2R5DQ14738 602 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 MTF1Q14872 753 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 TMEM196Q5HYL7 178 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 MDH1BQ5I0G3 518 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 TDRD10Q5VZ19 366 aaKnown RBP14.34□□□□□ -0.11
GCN1-206ENST00000549815 SYNPOQ8N3V7 929 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 OR6B3Q8NGW1 331 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 GOLGA5Q8TBA6 731 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 C8orf48Q96LL4 319 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 TTLL2Q9BWV7 592 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 TMEM30AQ9NV96 361 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 USP25Q9UHP3 1055 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 CEP250Q9BV73 2442 aa14.34□□□□□ -0.11
GCN1-206ENST00000549815 TRAV19A0A0A6YYK7 116 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 TRDMT1O14717 391 aaKnown RBP14.33□□□□□ -0.12
GCN1-206ENST00000549815 VNN1O95497 513 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 MYL1P05976 194 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 USP17L7P0C7H9 530 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 PTPN1P18031 435 aaKnown RBP14.33□□□□□ -0.12
GCN1-206ENST00000549815 TGM1P22735 817 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 GRIK1P39086 918 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 TNNC1P63316 161 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 DLG4P78352 724 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 ZXDBP98169 803 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 TRPC3Q13507 836 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 PDGFRLQ15198 375 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 FSTL4Q6MZW2 842 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 PKN3Q6P5Z2 889 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 DENND5BQ6ZUT9 1274 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 ARL14EPQ8N8R7 260 aaPredicted RBP14.33□□□□□ -0.12
GCN1-206ENST00000549815 OSCP1Q8WVF1 389 aa14.33□□□□□ -0.12
GCN1-206ENST00000549815 SYAP1Q96A49 352 aaPredicted RBP14.33□□□□□ -0.12
GCN1-206ENST00000549815 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms