RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 HADHBP55084 474 aaKnown RBP11.65□□□□□ -0.54
LINC00661-204ENST00000549354 WDR4P57081 412 aaKnown RBP11.65□□□□□ -0.54
LINC00661-204ENST00000549354 BNIP1Q12981 228 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 MORN1Q5T089 497 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 SCYL2Q6P3W7 929 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 OR5B17Q8NGF7 314 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 TRAPPC12Q8WVT3 735 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 HSPH1Q92598 858 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 FAXDC2Q96IV6 333 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 IGHA2P01877 340 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 ATP2A2P16615 1042 aaKnown RBP11.65□□□□□ -0.54
LINC00661-204ENST00000549354 EPHB2P29323 1055 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 TNFSF9P41273 254 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 BASP1P80723 227 aaKnown RBP11.65□□□□□ -0.54
LINC00661-204ENST00000549354 ZNF268Q14587 947 aaPredicted RBP11.65□□□□□ -0.54
LINC00661-204ENST00000549354 PKN2Q16513 984 aaKnown RBP11.65□□□□□ -0.54
LINC00661-204ENST00000549354 FAM187BQ17R55 369 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 DUSP28Q4G0W2 176 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 IQSEC1Q6DN90 963 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 TSHZ1Q6ZSZ6 1077 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 CEP120Q8N960 986 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 ANKLE1Q8NAG6 615 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 TTC8Q8TAM2 541 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 CKAP2Q8WWK9 683 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 CD101Q93033 1021 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 RPS6KC1Q96S38 1066 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 CGRRF1Q99675 332 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 PPP1R12CQ9BZL4 782 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 NPHS2Q9NP85 383 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 PTPRJQ12913 1337 aa11.65□□□□□ -0.54
LINC00661-204ENST00000549354 EME2A4GXA9 379 aaPredicted RBP11.65□□□□□ -0.55
LINC00661-204ENST00000549354 MAGEB2O15479 319 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 HLA-DRAP01903 254 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 HSPA6P17066 643 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 GNA15P30679 374 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 PCK1P35558 622 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 AP3M2P53677 418 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 MKRN3Q13064 507 aaKnown RBP11.65□□□□□ -0.55
LINC00661-204ENST00000549354 TFDP1Q14186 410 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 TRMT10CQ7L0Y3 403 aaKnown RBP11.65□□□□□ -0.55
LINC00661-204ENST00000549354 RASAL3Q86YV0 1011 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 TINF2Q9BSI4 451 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 ABHD16BQ9H3Z7 469 aa11.65□□□□□ -0.55
LINC00661-204ENST00000549354 CFAP73A6NFT4 308 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 ACKR2O00590 384 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 GSTA1P08263 222 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 GZMAP12544 262 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 TAC1P20366 129 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 RPA3P35244 121 aaPredicted RBP11.64□□□□□ -0.55
LINC00661-204ENST00000549354 RAD23BP54727 409 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 PDIA2Q13087 525 aaKnown RBP11.64□□□□□ -0.55
LINC00661-204ENST00000549354 PPP2R5DQ14738 602 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 BRSK2Q8IWQ3 736 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 ZBTB8OSQ8IWT0 167 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 NLRP4Q96MN2 994 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 ACSS2Q9NR19 701 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 VNN1O95497 513 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 HOXC6P09630 235 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 ADCYAP1R1P41586 468 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 ZBTB16Q05516 673 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 CRYMQ14894 314 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 TDRD10Q5VZ19 366 aaKnown RBP11.64□□□□□ -0.55
LINC00661-204ENST00000549354 MFSD7Q6UXD7 560 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 ARHGEF18Q6ZSZ5 1173 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 FBF1Q8TES7 1133 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 USP6NLQ92738 828 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 UTP4Q969X6 686 aaKnown RBP11.64□□□□□ -0.55
LINC00661-204ENST00000549354 SERPINB12Q96P63 405 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 OSBPL8Q9BZF1 889 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 RXFP1Q9HBX9 757 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC00661-204ENST00000549354 RBAKQ9NYW8 714 aaPredicted RBP11.64□□□□□ -0.55
LINC00661-204ENST00000549354 PHTF1Q9UMS5 762 aa11.64□□□□□ -0.55
LINC00661-204ENST00000549354 MYO18AQ92614 2054 aaKnown RBP11.63□□□□□ -0.55
LINC00661-204ENST00000549354 MANSC4A6NHS7 340 aaPredicted RBP11.63□□□□□ -0.55
LINC00661-204ENST00000549354 AVILO75366 819 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 PRKCBP05771 671 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 SMPD1P17405 629 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 IVDP26440 423 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 SETDB1Q15047 1291 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 TAF5Q15542 800 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 MAPK6Q16659 721 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 EFCAB12Q6NXP0 572 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 DPP9Q86TI2 863 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 RNF149Q8NC42 400 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 NPLOC4Q8TAT6 608 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 DDX1Q92499 740 aaKnown RBP11.63□□□□□ -0.55
LINC00661-204ENST00000549354 TTC17Q96AE7 1141 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 LRRC37BQ96QE4 947 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 PLVAPQ9BX97 442 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 DCLK3Q9C098 648 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 EBF2Q9HAK2 575 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CNTN6Q9UQ52 1028 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CST3P01034 146 aaPredicted RBP11.63□□□□□ -0.55
LINC00661-204ENST00000549354 INSRRP14616 1297 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 MAGEA4P43358 317 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 CDR2Q01850 454 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 MBTD1Q05BQ5 628 aa11.63□□□□□ -0.55
LINC00661-204ENST00000549354 ACVR2BQ13705 512 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms