RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 JDP2Q8WYK2 163 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 NKD2Q969F2 451 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 DHX33Q9H6R0 707 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 ACAD9Q9H845 621 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 MANSC1Q9H8J5 431 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 RNPEPL1Q9HAU8 725 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 DDX56Q9NY93 547 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 FAM155BO75949 473 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 BGNP21810 368 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 ELK3P41970 407 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 TNFAIP1Q13829 316 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 SMAD1Q15797 465 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 HADHQ16836 314 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 DUOXA2Q1HG44 320 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 EFHC2Q5JST6 749 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 DARS2Q6PI48 645 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 C1orf228Q6PIY5 440 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 ARFGAP1Q8N6T3 406 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 SPATA18Q8TC71 538 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 DTX3LQ8TDB6 740 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 NAF1Q96HR8 494 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 NLRP4Q96MN2 994 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 WDR83Q9BRX9 315 aaKnown RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 CYTH4Q9UIA0 394 aa12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 ZNF646O15015 1829 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF3-219ENST00000549151 CCDC195A0A1B0GUA6 201 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 SPATA31C2B4DYI2 1134 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 INO80B-WBP1J3KQ70 363 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 MAGEB2O15479 319 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ATP5HO75947 161 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 CALB2P22676 271 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 SERPINB3P29508 390 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 GCKP35557 465 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 RASSF2P50749 326 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 SLC8A3P57103 927 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 PTK7Q13308 1070 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 STXBP2Q15833 593 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 RAB6CQ53S08 254 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 SH3PXD2AQ5TCZ1 1133 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 CLNKQ7Z7G1 428 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 BRSK2Q8IWQ3 736 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ZNF280CQ8ND82 737 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 TSSK1BQ9BXA7 367 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 TEX13BQ9BXU2 312 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 INO80BQ9C086 356 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 RAB6CQ9H0N0 254 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ARMCX1Q9P291 453 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 HACL1Q9UJ83 578 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 STYXL1Q9Y6J8 313 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 H7C0C1 242 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 MCF2LO15068 1137 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ZWINTO95229 277 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ITGBL1O95965 494 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 INHBAP08476 426 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 PYGBP11216 843 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 KDELR1P24390 212 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ARL2P36404 184 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ATP5OP48047 213 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 FAAP100Q0VG06 881 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 KBTBD12Q3ZCT8 623 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 SCYL2Q6P3W7 929 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 TTC7BQ86TV6 843 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 PPM1NQ8N819 430 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 TRAPPC12Q8WVT3 735 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 CPXM1Q96SM3 734 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 TRIM55Q9BYV6 548 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 IQCGQ9H095 443 aaKnown RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ARL8BQ9NVJ2 186 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 WDR81Q562E7 1941 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 KBTBD13C9JR72 458 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ADCY3O60266 1144 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 HAUS5O94927 633 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 KITP10721 976 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ZNF132P52740 706 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 ARFIP2P53365 341 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 MCCD1P59942 119 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 EN1Q05925 392 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 VPS52Q8N1B4 723 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 UBA3Q8TBC4 463 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 STK32AQ8WU08 396 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 MARCOQ9UEW3 520 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 FARP1Q9Y4F1 1045 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 HEY1Q9Y5J3 304 aa12.49□□□□□ -0.41
RAPGEF3-219ENST00000549151 F5H423 210 aaPredicted RBP12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 KIF1CO43896 1103 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 STAT5BP51692 787 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 IRX4P78413 519 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 SGSM1Q2NKQ1 1148 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 KLHL38Q2WGJ6 581 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 LRRC38Q5VT99 294 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 CAPRIN2Q6IMN6 1127 aaKnown RBP12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 DSTYKQ6XUX3 929 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 NAT8LQ8N9F0 302 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 MCUR1Q96AQ8 359 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 SERAC1Q96JX3 654 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 OSBPL1AQ9BXW6 950 aa12.48□□□□□ -0.41
RAPGEF3-219ENST00000549151 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms