RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 HOXB3P14651 431 aaPredicted RBP21.32■■□□□ 1
CTDSP2-204ENST00000548823 STAT1P42224 750 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 LIG4P49917 911 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 KLHL30Q0D2K2 578 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 KIF5AQ12840 1032 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 TDRD12Q587J7 1177 aaKnown RBP21.32■■□□□ 1
CTDSP2-204ENST00000548823 ZNF569Q5MCW4 686 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 PPM1LQ5SGD2 360 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 CCDC122Q5T0U0 273 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 LIN9Q5TKA1 542 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 IQCEQ6IPM2 695 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 SRGAP1Q7Z6B7 1085 aa21.32■■□□□ 1
CTDSP2-204ENST00000548823 LRRIQ4A6NIV6 560 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 EXTL3O43909 919 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 XYLBO75191 536 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 ECI2O75521 394 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 CCDC172P0C7W6 258 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 APBA1Q02410 837 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 CYP24A1Q07973 514 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 PPP3CAQ08209 521 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 CAPSQ13938 189 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 SIM2Q14190 667 aaPredicted RBP21.31■■□□□ 1
CTDSP2-204ENST00000548823 SLC18A3Q16572 532 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 CDCA2Q69YH5 1023 aaPredicted RBP21.31■■□□□ 1
CTDSP2-204ENST00000548823 ZPBP2Q6X784 338 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 CBWD2Q8IUF1 395 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 ZNF687Q8N1G0 1237 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 PLEKHO2Q8TD55 490 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 PSPC1Q8WXF1 523 aaKnown RBP21.31■■□□□ 1
CTDSP2-204ENST00000548823 GAD1Q99259 594 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 C2orf40Q9H1Z8 148 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 MIOSQ9NXC5 875 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 ADAM28Q9UKQ2 775 aa21.31■■□□□ 1
CTDSP2-204ENST00000548823 FRYQ5TBA9 3013 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 URI1O94763 535 aaPredicted RBP21.3■■□□□ 1
CTDSP2-204ENST00000548823 C8AP07357 584 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 MLH1P40692 756 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 MAGEA1P43355 309 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 CCR3P51677 355 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 DLG4P78352 724 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 CLDN10P78369 228 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 POU5F1BQ06416 359 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 NPAS3Q8IXF0 933 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 SLC35F6Q8N357 371 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 BICD1Q96G01 975 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 IRX2Q9BZI1 471 aaPredicted RBP21.3■■□□□ 1
CTDSP2-204ENST00000548823 TMEM8AQ9HCN3 771 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 DNAJC12Q9UKB3 198 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 POLIQ9UNA4 740 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 IPPQ9Y573 584 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 NOTCH4Q99466 2003 aa21.3■■□□□ 1
CTDSP2-204ENST00000548823 F5P12259 2224 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 FASNP49327 2511 aaKnown RBP21.29■■□□□ 1
CTDSP2-204ENST00000548823 CTAGE9A4FU28 777 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 ZNF233A6NK53 670 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 MAN2B1O00754 1011 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 CCL16O15467 120 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 POU2F2P09086 479 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 SOX5P35711 763 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 MXI1P50539 228 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 SCNN1GP51170 649 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 LIMK1P53667 647 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 CYP27A1Q02318 531 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 KRT39Q6A163 491 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 ZSWIM2Q8NEG5 633 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 PRPF31Q8WWY3 499 aaKnown RBP21.29■■□□□ 1
CTDSP2-204ENST00000548823 DNASE1L2Q92874 299 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 NAPGQ99747 312 aaPredicted RBP21.29■■□□□ 1
CTDSP2-204ENST00000548823 CCDC113Q9H0I3 377 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 MINDY3Q9H8M7 445 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 GUCA1BQ9UMX6 200 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 NDRG2Q9UN36 371 aaKnown RBP21.29■■□□□ 1
CTDSP2-204ENST00000548823 MYH10P35580 1976 aa21.29■■□□□ 1
CTDSP2-204ENST00000548823 GOLGA8IPA6NC78 632 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 RCCD1A6NED2 376 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 GOLGA8JA6NMD2 632 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 ABL1P00519 1130 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 TFDP1Q14186 410 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 PRSS55Q6UWB4 352 aaPredicted RBP21.28■■□□□ 1
CTDSP2-204ENST00000548823 ZBTB8OSQ8IWT0 167 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 ASPMQ8IZT6 3477 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 SAAL1Q96ER3 474 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 ZFP42Q96MM3 310 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 CLSTN3Q9BQT9 956 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 LACRTQ9GZZ8 138 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 RNF39Q9H2S5 420 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 MRFAP1Q9Y605 127 aa21.28■■□□□ 1
CTDSP2-204ENST00000548823 LRRIQ3A6PVS8 624 aaPredicted RBP21.27■■□□□ 1
CTDSP2-204ENST00000548823 F8VZ95 297 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 TM4SF5O14894 197 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 CNR2P34972 360 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 GCLMP48507 274 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 LAMTOR4Q0VGL1 99 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 PSMD6Q15008 389 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 VPS36Q86VN1 386 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 RNF10Q8N5U6 811 aaKnown RBP21.27■■□□□ 1
CTDSP2-204ENST00000548823 FAM81BQ96LP2 452 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 NFKBIZQ9BYH8 718 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 PLA2G2FQ9BZM2 168 aa21.27■■□□□ 1
CTDSP2-204ENST00000548823 GDE1Q9NZC3 331 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms