RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 PIP5K1CO60331 668 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 ERN1O75460 977 aaKnown RBP4.89□□□□□ -1.63
PTCH1-216ENST00000548379 NCR1O76036 304 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 KCNA3P22001 575 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 PDIA3P30101 505 aaKnown RBP4.89□□□□□ -1.63
PTCH1-216ENST00000548379 PPIFP30405 207 aaKnown RBP4.89□□□□□ -1.63
PTCH1-216ENST00000548379 HALP42357 657 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 PXNP49023 591 aaPredicted RBP4.89□□□□□ -1.63
PTCH1-216ENST00000548379 VAV2P52735 878 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 RPS7P62081 194 aaKnown RBP4.89□□□□□ -1.63
PTCH1-216ENST00000548379 ICA1Q05084 483 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 MYO1EQ12965 1108 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 STARD3Q14849 445 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 ZNF750Q32MQ0 723 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 MGAT5BQ3V5L5 792 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 FBLN7Q53RD9 439 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 RRAGBQ5VZM2 374 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 PGBD2Q6P3X8 592 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 TLDC1Q6P9B6 456 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 TMEM108Q6UXF1 575 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 MICALCLQ6ZW33 695 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 KRT73Q86Y46 540 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 FAM9AQ8IZU1 332 aaPredicted RBP4.89□□□□□ -1.63
PTCH1-216ENST00000548379 ZNF527Q8NB42 609 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 GLIS1Q8NBF1 620 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 C8orf49Q96NF6 230 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 MAGEB5Q9BZ81 275 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 PPCSQ9HAB8 311 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 TBC1D23Q9NUY8 699 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 RGL1Q9NZL6 768 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 HDAC9Q9UKV0 1011 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 SLC39A10Q9ULF5 831 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 CEP170Q5SW79 1584 aa4.89□□□□□ -1.63
PTCH1-216ENST00000548379 TTBK1Q5TCY1 1321 aaPredicted RBP4.89□□□□□ -1.63
PTCH1-216ENST00000548379 TMEM200CA6NKL6 621 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 RAB27BO00194 218 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 NPC1O15118 1278 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 NBNO60934 754 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 NDST3O95803 873 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 CSTBP04080 98 aaKnown RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 CSF1RP07333 972 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 ITGALP20701 1170 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 NPTX2P47972 431 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 PTDSS1P48651 473 aaKnown RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 NDUFV1P49821 464 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 PLP2Q04941 152 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 SCAPQ12770 1279 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 TRIM14Q14142 442 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 ZRSR2Q15696 482 aaKnown RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 GEN1Q17RS7 908 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 TMEM95Q3KNT9 176 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 PRR16Q569H4 304 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 LCE1DQ5T752 114 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 CCDC174Q6PII3 467 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 BPIFB1Q8TDL5 484 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 DVL3Q92997 716 aaPredicted RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 MYEOVQ96EZ4 313 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 LRRC46Q96FV0 321 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 SNX27Q96L92 541 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 TRIM5Q9C035 493 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 CXorf36Q9H7Y0 433 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 UNKLQ9H9P5 680 aaKnown RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 AGO4Q9HCK5 861 aaKnown RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 GALNT9Q9HCQ5 603 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 HEYLQ9NQ87 328 aaPredicted RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 ZSCAN32Q9NX65 697 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 SMPD4Q9NXE4 827 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 NDRG4Q9ULP0 352 aaKnown RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 SSX2IPQ9Y2D8 614 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 MTO1Q9Y2Z2 717 aaKnown RBP4.88□□□□□ -1.63
PTCH1-216ENST00000548379 CEP83Q9Y592 693 aa4.88□□□□□ -1.63
PTCH1-216ENST00000548379 AQP7P3A6NL99 342 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 TOR1BO14657 336 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 CREB3O43889 395 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 FAM20BO75063 409 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 PEX11BO96011 259 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 HLA-DOAP06340 250 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 TPH1P17752 444 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 EGR1P18146 543 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 GRK6P43250 576 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 MAGEA10P43363 369 aaPredicted RBP4.87□□□□□ -1.63
PTCH1-216ENST00000548379 EFEMP1Q12805 493 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 RESTQ13127 1097 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 BLMHQ13867 455 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 RAB30Q15771 203 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 PDCD2Q16342 344 aaPredicted RBP4.87□□□□□ -1.63
PTCH1-216ENST00000548379 ZACNQ401N2 412 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 CD300EQ496F6 205 aaPredicted RBP4.87□□□□□ -1.63
PTCH1-216ENST00000548379 ANO1Q5XXA6 986 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 SFRP4Q6FHJ7 346 aaPredicted RBP4.87□□□□□ -1.63
PTCH1-216ENST00000548379 LAYNQ6UX15 382 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 RHOUQ7L0Q8 258 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 KCTD20Q7Z5Y7 419 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 CACNA2D3Q8IZS8 1091 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.87□□□□□ -1.63
PTCH1-216ENST00000548379 CHST13Q8NET6 341 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 EXTL1Q92935 676 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 AMBRA1Q9C0C7 1298 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 MAP3K2Q9Y2U5 619 aa4.87□□□□□ -1.63
PTCH1-216ENST00000548379 TSC22D4Q9Y3Q8 395 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms