RNA–Protein interactions for RNA: ENST00000548126.1

CCDC59-203, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 984 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-203ENST00000548126 DCTPP1Q9H773 170 aa7.58□□□□□ -1.2
CCDC59-203ENST00000548126 JMJD4Q9H9V9 463 aa7.58□□□□□ -1.2
CCDC59-203ENST00000548126 VAT1LQ9HCJ6 419 aa7.58□□□□□ -1.2
CCDC59-203ENST00000548126 GMIPQ9P107 970 aa7.58□□□□□ -1.2
CCDC59-203ENST00000548126 ANAPC4Q9UJX5 808 aa7.58□□□□□ -1.2
CCDC59-203ENST00000548126 FADS2P1A8MWK0 482 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 SIGLEC6O43699 453 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 RAB11FIP3O75154 756 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 RFPL2O75678 378 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 EFEMP2O95967 443 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 PFKLP17858 780 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 CCR3P51677 355 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 CYP4F8P98187 520 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 PLP2Q04941 152 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 SRSF5Q13243 272 aaKnown RBP7.57□□□□□ -1.2
CCDC59-203ENST00000548126 HDAC1Q13547 482 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-203ENST00000548126 COL28A1Q2UY09 1125 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 HSF5Q4G112 596 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-203ENST00000548126 ARSHQ5FYA8 562 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 MTHFD1LQ6UB35 978 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 TPRG1Q6ZUI0 275 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 MTSS1LQ765P7 747 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 GET4Q7L5D6 327 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-203ENST00000548126 TMC3Q7Z5M5 1100 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 ECHDC2Q86YB7 292 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 TMEFF1Q8IYR6 380 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 GOLM1Q8NBJ4 401 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 TRAPPC12Q8WVT3 735 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 ZNF707Q96C28 371 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-203ENST00000548126 LOXL4Q96JB6 756 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 AMNQ9BXJ7 453 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 MRPL9Q9BYD2 267 aaKnown RBP7.57□□□□□ -1.2
CCDC59-203ENST00000548126 NT5C3AQ9H0P0 336 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 TOMM22Q9NS69 142 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 KLHL14Q9P2G3 628 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 STK39Q9UEW8 545 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 GPR55Q9Y2T6 319 aaPredicted RBP7.57□□□□□ -1.2
CCDC59-203ENST00000548126 MSRB2Q9Y3D2 182 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 NEUROG3Q9Y4Z2 214 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 HECTD1Q9ULT8 2610 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 PCNX2A6NKB5 2137 aa7.57□□□□□ -1.2
CCDC59-203ENST00000548126 GCOM1H8Y6P7 765 aaPredicted RBP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 DHX16O60231 1041 aaKnown RBP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 ZC3H11AO75152 810 aaKnown RBP eCLIP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 UBOX5O94941 541 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 PRAMEF1O95521 474 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 CAPNS1P04632 268 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 GALTP07902 379 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 POLR2MP0CAP2 368 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 CEACAM1P13688 526 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 ZSCAN20P17040 1043 aaPredicted RBP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 CCNFP41002 786 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 CXCL12P48061 93 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 FNTBP49356 437 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 CRYBB1P53674 252 aaPredicted RBP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 PLCB4Q15147 1175 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 RRP12Q5JTH9 1297 aaKnown RBP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 CEP68Q76N32 757 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 FAM228AQ86W67 206 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 LONP2Q86WA8 852 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 PROSER1Q86XN7 944 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 NT5DC4Q86YG4 428 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 KIAA0319LQ8IZA0 1049 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 RNF169Q8NCN4 708 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 HDAC7Q8WUI4 952 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 SEC62Q99442 399 aaKnown RBP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 SPON2Q9BUD6 331 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 VN1R3Q9BXE9 311 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 MRPL17Q9NRX2 175 aaKnown RBP7.56□□□□□ -1.2
CCDC59-203ENST00000548126 TICRRQ7Z2Z1 1910 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 SPTA1P02549 2419 aa7.56□□□□□ -1.2
CCDC59-203ENST00000548126 PIEZO2Q9H5I5 2752 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 SHROOM3Q8TF72 1996 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 ACACAQ13085 2346 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 A0A0U1RQF3 1178 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 A0A1W2PQ27 194 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 A0A1W2PQ64 194 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 A0A1W2PQC6 194 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 A0A1W2PQD8 194 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 SHISA7A6NL88 538 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 NUDT19A8MXV4 375 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 SMARCA5O60264 1052 aaPredicted RBP7.55□□□□□ -1.2
CCDC59-203ENST00000548126 BUB1BO60566 1050 aaPredicted RBP7.55□□□□□ -1.2
CCDC59-203ENST00000548126 DNAJA2O60884 412 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 ATP9AO75110 1047 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 CLEC3AO75596 197 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 GLUD1P00367 558 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 SSBP05455 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
CCDC59-203ENST00000548126 MYBP10242 640 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 PRKCAP17252 672 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 KLRC1P26715 233 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 NFKB2Q00653 900 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 SATB1Q01826 763 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 FAM160A1Q05DH4 1040 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 TROAPQ12815 778 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 GNL2Q13823 731 aaKnown RBP7.55□□□□□ -1.2
CCDC59-203ENST00000548126 NR1I3Q14994 352 aa7.55□□□□□ -1.2
CCDC59-203ENST00000548126 ZXDCQ2QGD7 858 aaPredicted RBP7.55□□□□□ -1.2
CCDC59-203ENST00000548126 ASPRV1Q53RT3 343 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms