RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ZNF77Q15935 545 aa21.8■■□□□ 1.08
SSH1-207ENST00000547862 C4orf50Q6ZRC1 276 aa21.8■■□□□ 1.08
SSH1-207ENST00000547862 RDH13Q8NBN7 331 aa21.8■■□□□ 1.08
SSH1-207ENST00000547862 KBTBD7Q8WVZ9 684 aa21.8■■□□□ 1.08
SSH1-207ENST00000547862 TNMDQ9H2S6 317 aa21.8■■□□□ 1.08
SSH1-207ENST00000547862 ZSCAN16Q9H4T2 348 aaPredicted RBP21.8■■□□□ 1.08
SSH1-207ENST00000547862 FBRSL1Q9HCM7 1045 aaKnown RBP21.8■■□□□ 1.08
SSH1-207ENST00000547862 TRDMT1O14717 391 aaKnown RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 GABRDO14764 452 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 LRP3O75074 770 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 DLATP10515 647 aaKnown RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 BDNFP23560 247 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 LMO2P25791 158 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 GJA4P35212 333 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 GRIK1P39086 918 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 NASPP49321 788 aaPredicted RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 CYP2J2P51589 502 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 CSRP2Q16527 193 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 FOXD4L6Q3SYB3 417 aaPredicted RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 CFAP221Q4G0U5 840 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 AASDHQ4L235 1098 aaPredicted RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 FOXD4L3Q6VB84 417 aaPredicted RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 NELFCDQ8IXH7 590 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 FSIP1Q8NA03 581 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 RPLP0P6Q8NHW5 317 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 SH3RF2Q8TEC5 729 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 FUBP3Q96I24 572 aaKnown RBP eCLIP21.79■■□□□ 1.08
SSH1-207ENST00000547862 CNTNAP3BQ96NU0 1288 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 P2RY13Q9BPV8 354 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 CNTNAP3Q9BZ76 1288 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 ARRDC1-AS1Q9H2J1 176 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 ECT2Q9H8V3 914 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 CRTAC1Q9NQ79 661 aa21.79■■□□□ 1.08
SSH1-207ENST00000547862 TFIP11Q9UBB9 837 aaKnown RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 MAGEC2Q9UBF1 373 aaPredicted RBP21.79■■□□□ 1.08
SSH1-207ENST00000547862 KIAA0391O15091 583 aaKnown RBP21.78■■□□□ 1.08
SSH1-207ENST00000547862 SPTLC2O15270 562 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 ANXA13P27216 316 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 GALK1P51570 392 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 AMPD2Q01433 879 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 IFRD2Q12894 506 aaPredicted RBP21.78■■□□□ 1.08
SSH1-207ENST00000547862 SF3A2Q15428 464 aaKnown RBP21.78■■□□□ 1.08
SSH1-207ENST00000547862 SURF1Q15526 300 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 MDH1BQ5I0G3 518 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 KBTBD6Q86V97 674 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 LINC00301Q8NCQ3 95 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 SPATA18Q8TC71 538 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 OSCP1Q8WVF1 389 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 GAB3Q8WWW8 586 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 ATP2A3Q93084 1043 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 INTS4Q96HW7 963 aaKnown RBP21.78■■□□□ 1.08
SSH1-207ENST00000547862 MYRFLQ96LU7 910 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 TRIM9Q9C026 710 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 CDH9Q9ULB4 789 aa21.78■■□□□ 1.08
SSH1-207ENST00000547862 K7ELQ4 463 aaPredicted RBP21.77■■□□□ 1.08
SSH1-207ENST00000547862 CLIC2O15247 247 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 ATG13O75143 517 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 TNNI1P19237 187 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 HOXD13P35453 343 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 E2F4Q16254 413 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 DUOXA2Q1HG44 320 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 PPM1JQ5JR12 505 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 FAM26FQ5R3K3 315 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 WDR49Q8IV35 697 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 C12orf50Q8NA57 414 aaPredicted RBP21.77■■□□□ 1.08
SSH1-207ENST00000547862 CD101Q93033 1021 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 MRPL45Q9BRJ2 306 aaKnown RBP21.77■■□□□ 1.08
SSH1-207ENST00000547862 SMOC1Q9H4F8 434 aa21.77■■□□□ 1.08
SSH1-207ENST00000547862 MORC2Q9Y6X9 1032 aaPredicted RBP21.77■■□□□ 1.08
SSH1-207ENST00000547862 MYH10P35580 1976 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 SCAMP3O14828 347 aaKnown RBP21.76■■□□□ 1.07
SSH1-207ENST00000547862 SLC30A4O14863 429 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 EIF3DO15371 548 aaKnown RBP eCLIP21.76■■□□□ 1.07
SSH1-207ENST00000547862 ABL1P00519 1130 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 DRD1P21728 446 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 CASP1P29466 404 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 HOXA6P31267 233 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 MAGEA11P43364 429 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 USP46P62068 366 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 SNRNP35Q16560 246 aaKnown RBP21.76■■□□□ 1.07
SSH1-207ENST00000547862 EML3Q32P44 896 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 FAM171BQ6P995 826 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 HS2ST1Q7LGA3 356 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 CCDC127Q96BQ5 260 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 ZNF396Q96N95 335 aaPredicted RBP21.76■■□□□ 1.07
SSH1-207ENST00000547862 FNBP1Q96RU3 617 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 LRRC27Q9C0I9 530 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 SNX25Q9H3E2 840 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 AGPAT3Q9NRZ7 376 aa21.76■■□□□ 1.07
SSH1-207ENST00000547862 SOBPA7XYQ1 873 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 HDCP19113 662 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 WARSP23381 471 aaKnown RBP21.75■■□□□ 1.07
SSH1-207ENST00000547862 SEC13P55735 322 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 TNNC1P63316 161 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 DPH6Q7L8W6 267 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 TRAPPC11Q7Z392 1133 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 CACNA2D4Q7Z3S7 1137 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 OR6B3Q8NGW1 331 aa21.75■■□□□ 1.07
SSH1-207ENST00000547862 EZH1Q92800 747 aaPredicted RBP21.75■■□□□ 1.07
SSH1-207ENST00000547862 EXOC4Q96A65 974 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms