RNA–Protein interactions for RNA: ENST00000547823.1

DEPDC4-204, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 320 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-204ENST00000547823 ATP13A4Q4VNC1 1196 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 MIDNQ504T8 468 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 UBE3BQ7Z3V4 1068 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 ZNF804AQ7Z570 1209 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 YTHDF3Q7Z739 585 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 ZDHHC17Q8IUH5 632 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 SAMD14Q8IZD0 417 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 NGDNQ8NEJ9 315 aaKnown RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 FBXO18Q8NFZ0 1043 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 MYCBPAPQ8TBZ2 947 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 LPIN2Q92539 896 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 ADI1Q9BV57 179 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 ACE2Q9BYF1 805 aaPredicted RBP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 GSTO2Q9H4Y5 243 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 USP54Q70EL1 1684 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 CCDC88AQ3V6T2 1871 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 TAF1LQ8IZX4 1826 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 VPS8Q8N3P4 1428 aa3.19□□□□□ -1.9
DEPDC4-204ENST00000547823 CNTNAP1P78357 1384 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 A0A0C4DFX4 3053 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 EXOC5O00471 708 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 IGSF3O75054 1194 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 NXPH3O95157 252 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 ELFN1P0C7U0 828 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 DRD4P21917 467 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 CCT8P50990 548 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 CDK17Q00537 523 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 MGAT2Q10469 447 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 MUM1Q2TAK8 710 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 TEDDM1Q5T9Z0 273 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 SDE2Q6IQ49 451 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 SLC18B1Q6NT16 456 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 TOM1L2Q6ZVM7 507 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 SMRP1Q8NCR6 262 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 SLC30A5Q8TAD4 765 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 TSPEARQ8WU66 669 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 TBC1D5Q92609 795 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 IFT122Q9HBG6 1241 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 ELOVL5Q9NYP7 299 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 ZNF112Q9UJU3 913 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 TMA7Q9Y2S6 64 aaKnown RBP3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 ABCC6O95255 1503 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 ADGRF5Q8IZF2 1346 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 WDR17Q8IZU2 1322 aa3.18□□□□□ -1.9
DEPDC4-204ENST00000547823 C5P01031 1676 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 CEP290O15078 2479 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 EIF3AQ14152 1382 aaKnown RBP3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 CCDC195A0A1B0GUA6 201 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 PDE8AO60658 829 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 TOP3BO95985 862 aaKnown RBP3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 HNRNPCP07910 306 aaKnown RBP eCLIP3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 MYCLP1P12525 358 aaPredicted RBP3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 HSD3B2P26439 372 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 CCKARP32238 428 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 NR4A2P43354 598 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 SLC5A3P53794 718 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 GYS2P54840 703 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 MALLQ13021 153 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 MTM1Q13496 603 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 ADGRG5Q8IZF4 528 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 PIGOQ8TEQ8 1089 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 STON2Q8WXE9 905 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 PRAM1Q96QH2 718 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 SH2D3AQ9BRG2 576 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 EHD3Q9NZN3 535 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 ACTL7AQ9Y615 435 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 MEGF6O75095 1541 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 TRIOBPQ9H2D6 2365 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 ADAMTS7Q9UKP4 1686 aa3.17□□□□□ -1.9
DEPDC4-204ENST00000547823 SZT2Q5T011 3432 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 UBR3Q6ZT12 1888 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 MYO1FO00160 1098 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 TOR1BO14657 336 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 KIAA0391O15091 583 aaKnown RBP3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 MTHFD1P11586 935 aaKnown RBP3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 VEGFAP15692 232 aaPredicted RBP3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 PPP3CBP16298 524 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 FPR1P21462 350 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 GATA3P23771 443 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 PCSK1P29120 753 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 MCAMP43121 646 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 PDCD1Q15116 288 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 TWIST1Q15672 202 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 PROSER3Q2NL68 480 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 ZNF260Q3ZCT1 412 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 TMEM119Q4V9L6 283 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 ZNF66Q6ZN08 573 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 ZNF551Q7Z340 670 aaPredicted RBP3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 RNF180Q86T96 592 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 AOPEPQ8N6M6 819 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 MYOCQ99972 504 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 PRSS22Q9GZN4 317 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 C11orf54Q9H0W9 315 aaPredicted RBP3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 VPS16Q9H269 839 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 EBF3Q9H4W6 596 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 SERGEFQ9UGK8 458 aa3.16□□□□□ -1.9
DEPDC4-204ENST00000547823 ST3GAL5Q9UNP4 418 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms