RNA–Protein interactions for RNA: ENST00000547374.5

BRF1-210, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, human

TSL 5

Gene BRF1, Length 3,809 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRF1-210	ENST00000547374	CALB1	P05937	261 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	MUT	P22033	750 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	IL1R2	P27930	398 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	KLF1	Q13351	362 aa	Predicted RBP	13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	SPDYE2	Q495Y8	402 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	RNF43	Q68DV7	783 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	C12orf56	Q8IXR9	622 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	SPDYE1	Q8NFV5	336 aa	Predicted RBP	13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	UCMA	Q8WVF2	138 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	IL1RAPL1	Q9NZN1	696 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	MYO18A	Q92614	2054 aa	Known RBP	13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	KLRG2	A4D1S0	409 aa	Predicted RBP	13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	TMEM63A	O94886	807 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	KLRC2	P26717	231 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	AMHR2	Q16671	573 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	XKR3	Q5GH77	459 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	B3GNT9	Q6UX72	402 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	RSPH3	Q86UC2	560 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	APOL6	Q9BWW8	343 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	ASCC2	Q9H1I8	757 aa	Predicted RBP	13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	RREB1	Q92766	1687 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	hCG_1818297	A0A087WSY0	165 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	DPPA5	A6NC42	116 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	NVL	O15381	856 aa	Known RBP	13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	TNNC2	P02585	160 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	GART	P22102	1010 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	SP2	Q02086	613 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	CFAP157	Q5JU67	520 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	C16orf46	Q6P387	395 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	TLDC1	Q6P9B6	456 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	VSIG10L	Q86VR7	867 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	IGDCC3	Q8IVU1	814 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	KCTD17	Q8N5Z5	321 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	FAM49B	Q9NUQ9	324 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	SLC5A4	Q9NY91	659 aa		13.59	□□□□□ -0.23
BRF1-210	ENST00000547374	TMEM191C	A6NGB0	347 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	SPDYE5	A6NIY4	337 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	B4GALT5	O43286	388 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	UGT1A9	O60656	530 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	DUOXA2	Q1HG44	320 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	SNX30	Q5VWJ9	437 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	CLNK	Q7Z7G1	428 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	PPIL6	Q8IXY8	311 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	HACE1	Q8IYU2	909 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	C7orf43	Q8WVR3	580 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	CPT1B	Q92523	772 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	USP6NL	Q92738	828 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	UGT1A7	Q9HAW7	530 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	UGT1A10	Q9HAW8	530 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	UGT1A8	Q9HAW9	530 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	MAST2	Q6P0Q8	1798 aa		13.58	□□□□□ -0.23
BRF1-210	ENST00000547374	CENPF	P49454	3210 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	DKC1	O60832	514 aa	Known RBP eCLIP	13.58	□□□□□ -0.24	2e-6	■■■■■ 56.4
BRF1-210	ENST00000547374	PEX11A	O75192	247 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	OAS1	P00973	400 aa	Known RBP	13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	CYP1A1	P04798	512 aa	Predicted RBP	13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	POLR2B	P30876	1174 aa	Known RBP	13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	ZNF200	P98182	395 aa	Predicted RBP	13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	RIPK1	Q13546	671 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	PSMD6	Q15008	389 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	MORF4L2	Q15014	288 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	CHI3L2	Q15782	390 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	CYP39A1	Q9NYL5	469 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	STARD13	Q9Y3M8	1113 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	KIF1C	O43896	1103 aa	Known RBP	13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	ZBED1	O96006	694 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	EDN1	P05305	212 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	CXCL8	P10145	99 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	PDGFRA	P16234	1089 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	MMP8	P22894	467 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	TBXAS1	P24557	533 aa	Predicted RBP	13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	GCA	P28676	217 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	PTPN20	Q4JDL3	420 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	TSC22D3	Q99576	134 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	MYOZ2	Q9NPC6	264 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	ZFAT	Q9P243	1243 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	PRKAG3	Q9UGI9	489 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	STRC	Q7RTU9	1775 aa		13.58	□□□□□ -0.24
BRF1-210	ENST00000547374	CCDC160	A6NGH7	325 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	USP1	O94782	785 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	NCF2	P19878	526 aa	Predicted RBP	13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	MIP	P30301	263 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	GMPR	P36959	345 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	ABL2	P42684	1182 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	ABCG1	P45844	678 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	PHKA2	P46019	1235 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	SESN2	P58004	480 aa	Predicted RBP	13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	EN1	Q05925	392 aa	Predicted RBP	13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	ZNF252P-AS1	Q0IIN9	211 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	LY6K	Q17RY6	165 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	ZNF667	Q5HYK9	610 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	RNF220	Q5VTB9	566 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	PLEKHA7	Q6IQ23	1121 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	NUDCD3	Q8IVD9	361 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	SERAC1	Q96JX3	654 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	DEFB129	Q9H1M3	183 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	SLC17A6	Q9P2U8	582 aa		13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.57	□□□□□ -0.24
BRF1-210	ENST00000547374	TTLL3	Q9Y4R7	772 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms