RNA–Protein interactions for RNA: ENST00000547338.5

RBFOX1-207, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2 BASIC

Gene RBFOX1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-207ENST00000547338 AJAP1Q9UKB5 411 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 TTC7AQ9ULT0 858 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 C2orf16Q68DN1 1984 aa18.34■□□□□ 0.53
RBFOX1-207ENST00000547338 LOC730098B7Z3J9 87 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 CCDC188H7C350 402 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 I3L4J1 428 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 TULP1O00294 542 aaPredicted RBP18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 FOXN3O00409 490 aaPredicted RBP18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 OGTO15294 1046 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 ADAM12O43184 909 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 WEE2P0C1S8 567 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 SRGAP2BP0DMP2 458 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 KLRC2P26717 231 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 DMTNQ08495 405 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 CBX2Q14781 532 aaPredicted RBP18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 HSP90B2PQ58FF3 399 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 RARS2Q5T160 578 aaKnown RBP18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 FAM171A1Q5VUB5 890 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 GJB7Q6PEY0 223 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 LILRA6Q6PI73 481 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 DCLRE1AQ6PJP8 1040 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 DENND4AQ7Z401 1863 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 PIK3R5Q8WYR1 880 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 UROC1Q96N76 676 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 ISCUQ9H1K1 167 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 ADAM7Q9H2U9 754 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 STIM2Q9P246 746 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 FNIP2Q9P278 1114 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 CPSF3Q9UKF6 684 aaKnown RBP18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 AMFRQ9UKV5 643 aa18.33■□□□□ 0.53
RBFOX1-207ENST00000547338 ZNF233A6NK53 670 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 LACTBL1A8MY62 500 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 B3GAT3O94766 335 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 FGFR3P22607 806 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 BRCC3P46736 316 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 GCLMP48507 274 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 AARSP49588 968 aaKnown RBP eCLIP18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 CLDN10P78369 228 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 C8orf74Q6P047 294 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 EMBQ6PCB8 327 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 PEX26Q7Z412 305 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 FAM71AQ8IYT1 594 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 FBXL13Q8NEE6 735 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 ZSWIM2Q8NEG5 633 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 CLSTN3Q9BQT9 956 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 TTPALQ9BTX7 342 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 MSTO1Q9BUK6 570 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 SLC38A7Q9NVC3 462 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 DZANK1Q9NVP4 752 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 TMEM59LQ9UK28 342 aa18.33■□□□□ 0.52
RBFOX1-207ENST00000547338 PODXLO00592 558 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 EXTL3O43909 919 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 RTN2O75298 545 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 ADH1AP07327 375 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 SSTR3P32745 418 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 MATR3P43243 847 aaKnown RBP eCLIP18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 DLG4P78352 724 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 CYP24A1Q07973 514 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 C2orf54Q08AI8 447 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 KIAA1841Q6NSI8 718 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 CRELD2Q6UXH1 353 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 RSPO2Q6UXX9 243 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 GLYCTKQ8IVS8 523 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 RASGEF1CQ8N431 466 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 FAM71BQ8TC56 605 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 POMGNT1Q8WZA1 660 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 SHC3Q92529 594 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 NT5C1BQ96P26 610 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 NAP1L3Q99457 506 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 PHF7Q9BWX1 381 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 POMKQ9H5K3 350 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 PLEKHA5Q9HAU0 1116 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 C11orf16Q9NQ32 467 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 SSX2IPQ9Y2D8 614 aa18.32■□□□□ 0.52
RBFOX1-207ENST00000547338 MTCL1Q9Y4B5 1905 aaKnown RBP18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 TGM5O43548 720 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 MTA2O94776 668 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 PAPLNO95428 1278 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 FTCDO95954 541 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 SPATA31D3P0C874 917 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 TKTP29401 623 aaKnown RBP18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 ACOT2P49753 483 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 GUCY2FP51841 1108 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 ARHGAP44Q17R89 818 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 TMC5Q6UXY8 1006 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 SPATA31D4Q6ZUB0 917 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 OLIG1Q8TAK6 271 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 DDX27Q96GQ7 796 aaKnown RBP18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 HES6Q96HZ4 224 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 LRRC1Q9BTT6 524 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 MAN1C1Q9NR34 630 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 RAB20Q9NX57 234 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 PSD3Q9NYI0 1048 aa18.31■□□□□ 0.52
RBFOX1-207ENST00000547338 MIF4GDA9UHW6 222 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 PI4K2BG5E9Z4 385 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 OAS2P29728 719 aaKnown RBP18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 WNT7BP56706 349 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 BPIFB4P59827 614 aa18.3■□□□□ 0.52
RBFOX1-207ENST00000547338 GCNT1Q02742 428 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms