RNA–Protein interactions for RNA: ENST00000546735.5

TROAP-203, Transcript of trophinin associated protein, humanhuman

TSL 1 (best)

Gene TROAP, Length 1,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-203ENST00000546735 C2orf78A6NCI8 922 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 HRO43593 1189 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 UBE4BO95155 1302 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 CKMP06732 381 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 GRIK1P39086 918 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 MAGEA11P43364 429 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 CASP4P49662 377 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 USP46P62068 366 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 FOXK2Q01167 660 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 MTF1Q14872 753 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 RSPO4Q2I0M5 234 aaPredicted RBP15.3■□□□□ 0.04
TROAP-203ENST00000546735 MDH1BQ5I0G3 518 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 FSTL4Q6MZW2 842 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 CC2D1AQ6P1N0 951 aaPredicted RBP15.3■□□□□ 0.04
TROAP-203ENST00000546735 C4orf50Q6ZRC1 276 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 HS2ST1Q7LGA3 356 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 ARL14EPQ8N8R7 260 aaPredicted RBP15.3■□□□□ 0.04
TROAP-203ENST00000546735 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
TROAP-203ENST00000546735 PCED1BQ96HM7 432 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 CHAMP1Q96JM3 812 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 DPEP3Q9H4B8 488 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 MAGEF1Q9HAY2 307 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 FBRSL1Q9HCM7 1045 aaKnown RBP15.3■□□□□ 0.04
TROAP-203ENST00000546735 POLR3BQ9NW08 1133 aaPredicted RBP15.3■□□□□ 0.04
TROAP-203ENST00000546735 GMEB2Q9UKD1 530 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 USP18Q9UMW8 372 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 WNT6Q9Y6F9 365 aa15.3■□□□□ 0.04
TROAP-203ENST00000546735 TRAV19A0A0A6YYK7 116 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 SOBPA7XYQ1 873 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 PAPSS2O95340 614 aaPredicted RBP15.29■□□□□ 0.04
TROAP-203ENST00000546735 EGFP01133 1207 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 USP17L7P0C7H9 530 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 TGM1P22735 817 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 PXNP49023 591 aaPredicted RBP15.29■□□□□ 0.04
TROAP-203ENST00000546735 MYL6P60660 151 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 FAM160A1Q05DH4 1040 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 SIM2Q14190 667 aaPredicted RBP15.29■□□□□ 0.04
TROAP-203ENST00000546735 ZNF268Q14587 947 aaPredicted RBP15.29■□□□□ 0.04
TROAP-203ENST00000546735 ZNF77Q15935 545 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 BMT2Q1RMZ1 405 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 WDR72Q3MJ13 1102 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 TMEM196Q5HYL7 178 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 DGLUCYQ7Z3D6 616 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 LONP2Q86WA8 852 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 OR6B3Q8NGW1 331 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 PLEKHO2Q8TD55 490 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 ELMO3Q96BJ8 720 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 SNX25Q9H3E2 840 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 GCNT4Q9P109 453 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 RAB23Q9ULC3 237 aa15.29■□□□□ 0.04
TROAP-203ENST00000546735 KIF26AQ9ULI4 1882 aaPredicted RBP15.29■□□□□ 0.04
TROAP-203ENST00000546735 DNAH14Q0VDD8 3507 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 PVALEFA0A1B0GWK0 134 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 MED19A0JLT2 244 aaPredicted RBP15.28■□□□□ 0.04
TROAP-203ENST00000546735 KLRC4O43908 158 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 EXOC3O60645 756 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 GJA4P35212 333 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 GNL1P36915 607 aaPredicted RBP15.28■□□□□ 0.04
TROAP-203ENST00000546735 GALK1P51570 392 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 CACNA2D1P54289 1103 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 TNNC1P63316 161 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 SPEM2Q0P670 501 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 STK4Q13043 487 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 TRPC3Q13507 836 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 PUM1Q14671 1186 aaKnown RBP eCLIP15.28■□□□□ 0.04
TROAP-203ENST00000546735 KNOP1Q1ED39 458 aaKnown RBP15.28■□□□□ 0.04
TROAP-203ENST00000546735 VSTM1Q6UX27 236 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 SYNPOQ8N3V7 929 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 MYCBPAPQ8TBZ2 947 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 SH3RF2Q8TEC5 729 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 OSCP1Q8WVF1 389 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 DUS2Q9NX74 493 aaKnown RBP15.28■□□□□ 0.04
TROAP-203ENST00000546735 DLL3Q9NYJ7 618 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 NXF1Q9UBU9 619 aaKnown RBP15.28■□□□□ 0.04
TROAP-203ENST00000546735 RCOR1Q9UKL0 485 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 OBSL1O75147 1896 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 ZNF292O60281 2723 aa15.28■□□□□ 0.04
TROAP-203ENST00000546735 A8MXQ7 604 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 TRDMT1O14717 391 aaKnown RBP15.27■□□□□ 0.04
TROAP-203ENST00000546735 ACTN4O43707 911 aaKnown RBP15.27■□□□□ 0.04
TROAP-203ENST00000546735 RNF40O75150 1001 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 TACC1O75410 805 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 PTPN1P18031 435 aaKnown RBP15.27■□□□□ 0.04
TROAP-203ENST00000546735 HDCP19113 662 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 ANXA13P27216 316 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 IFNAR2P48551 515 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 SNRPFP62306 86 aaKnown RBP15.27■□□□□ 0.04
TROAP-203ENST00000546735 ZXDBP98169 803 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 GRSF1Q12849 480 aaKnown RBP eCLIP15.27■□□□□ 0.04
TROAP-203ENST00000546735 USP4Q13107 963 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 PDGFRLQ15198 375 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 MAPRE1Q15691 268 aaKnown RBP15.27■□□□□ 0.04
TROAP-203ENST00000546735 LAIR1Q6GTX8 287 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 DENND5BQ6ZUT9 1274 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 C12orf56Q8IXR9 622 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 CEP57L1Q8IYX8 460 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 FSIP1Q8NA03 581 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 KIAA0895Q8NCT3 520 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 PAGE5Q96GU1 130 aa15.27■□□□□ 0.04
TROAP-203ENST00000546735 SPATA17Q96L03 361 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms