RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 MSL3Q8N5Y2 521 aaKnown RBP12.61□□□□□ -0.39
CCDC38-202ENST00000546386 OSBPL8Q9BZF1 889 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 DNPEPQ9ULA0 475 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 MYO7AQ13402 2215 aa12.61□□□□□ -0.39
CCDC38-202ENST00000546386 DCDC2CA8MYV0 355 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 MIF4GDA9UHW6 222 aaKnown RBP12.6□□□□□ -0.39
CCDC38-202ENST00000546386 BANF1O75531 89 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 CSPG5O95196 566 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 SHBGP04278 402 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 PDGFRAP16234 1089 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 HPDP32754 393 aaPredicted RBP12.6□□□□□ -0.39
CCDC38-202ENST00000546386 COILP38432 576 aaPredicted RBP12.6□□□□□ -0.39
CCDC38-202ENST00000546386 CACNA2D1P54289 1103 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 EPHB4P54760 987 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 YWHAEP62258 255 aaKnown RBP12.6□□□□□ -0.39
CCDC38-202ENST00000546386 KRT17Q04695 432 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 NOGQ13253 232 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 UAP1Q16222 522 aaPredicted RBP12.6□□□□□ -0.39
CCDC38-202ENST00000546386 DCAF4L1Q3SXM0 396 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 CCDC26Q8TAB7 109 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 PIK3R5Q8WYR1 880 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 FAM149B1Q96BN6 582 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 ADAM21Q9UKJ8 722 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 PLAAQ9Y263 795 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 MYO15AQ9UKN7 3530 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 CYB561D2O14569 222 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 B4GALT3O60512 393 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 B3GAT3O94766 335 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 HSD17B3P37058 310 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 GAD2Q05329 585 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 PAK2Q13177 524 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 ZC3H18Q86VM9 953 aaKnown RBP12.6□□□□□ -0.39
CCDC38-202ENST00000546386 RHOT1Q8IXI2 618 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 TET1Q8NFU7 2136 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 ZNF296Q8WUU4 475 aaPredicted RBP12.6□□□□□ -0.39
CCDC38-202ENST00000546386 RXFP2Q8WXD0 754 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 PEBP4Q96S96 227 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 TMEM209Q96SK2 561 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 ERP44Q9BS26 406 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 KATNAL1Q9BW62 490 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 TMEM30AQ9NV96 361 aa12.6□□□□□ -0.39
CCDC38-202ENST00000546386 TCRBV5S1A1TA0A578 114 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 MTA2O94776 668 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 GNAT1P11488 350 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 MIPP30301 263 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 GATMP50440 423 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 HADHBP55084 474 aaKnown RBP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 ITIH3Q06033 890 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 SMAD1Q15797 465 aaKnown RBP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 CEP85LQ5SZL2 805 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 ZNF771Q7L3S4 317 aaPredicted RBP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 TMCO2Q7Z6W1 182 aaPredicted RBP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 APPL2Q8NEU8 664 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 KCNN1Q92952 543 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 SEMA4AQ9H3S1 761 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 CALCOCO1Q9P1Z2 691 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 PHF2O75151 1096 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 TOMM70O94826 608 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 CALB1P05937 261 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 OR4Q2P0C623 313 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 P4HA1P13674 534 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 CHKAP35790 457 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 PTGIRP43119 386 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 MAP3K7CLP57077 242 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 MTFR1Q15390 333 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 CA9Q16790 459 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 MDH1BQ5I0G3 518 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 ADGRF2Q8IZF7 708 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 DDX23Q9BUQ8 820 aaKnown RBP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 TSPYL2Q9H2G4 693 aaPredicted RBP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 SNX25Q9H3E2 840 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 AVENQ9NQS1 362 aaPredicted RBP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 CNTN3Q9P232 1028 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 IP6K2Q9UHH9 426 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 NUDT5Q9UKK9 219 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 ZNF148Q9UQR1 794 aa12.59□□□□□ -0.39
CCDC38-202ENST00000546386 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.59□□□□□ -0.39
CCDC38-202ENST00000546386 CHD9Q3L8U1 2897 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 PAPSS1O43252 624 aaPredicted RBP12.58□□□□□ -0.4
CCDC38-202ENST00000546386 HUS1O60921 280 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 ACSL3O95573 720 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 INHAP05111 366 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 ADCY8P40145 1251 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 ACLYP53396 1101 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 TERF2Q15554 542 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 TTMPQ5BVD1 217 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 CFAP58Q5T655 872 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 C1orf228Q6PIY5 440 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 TRIM72Q6ZMU5 477 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 SERINC5Q86VE9 423 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 PYROXD2Q8N2H3 581 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 KCTD6Q8NC69 237 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 C3orf20Q8ND61 904 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 MED10Q9BTT4 135 aa12.58□□□□□ -0.4
CCDC38-202ENST00000546386 SENP6Q9GZR1 1112 aaPredicted RBP12.58□□□□□ -0.4
CCDC38-202ENST00000546386 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.58□□□□□ -0.4
CCDC38-202ENST00000546386 UBQLN1Q9UMX0 589 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms