RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 RPL10AP62906 217 aaKnown RBP13.47□□□□□ -0.25
COPS7A-221ENST00000546229 BFSP1Q12934 665 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 ALCAMQ13740 583 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 CEP68Q76N32 757 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 EPM2AIP1Q7L775 607 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-221ENST00000546229 SYT13Q7L8C5 426 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 CACNA2D4Q7Z3S7 1137 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 CBWD2Q8IUF1 395 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 CAMKK1Q8N5S9 505 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 MYLPFQ96A32 169 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 USP28Q96RU2 1077 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 P2RY13Q9BPV8 354 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 DUSP15Q9H1R2 295 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-221ENST00000546229 SMOC1Q9H4F8 434 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 INTS13Q9NVM9 706 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 UXTQ9UBK9 157 aaPredicted RBP13.47□□□□□ -0.25
COPS7A-221ENST00000546229 EBF1Q9UH73 591 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 ARHGAP26Q9UNA1 814 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 EXOC7Q9UPT5 735 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 PCDHGA5Q9Y5G8 931 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 SNX9Q9Y5X1 595 aa13.47□□□□□ -0.25
COPS7A-221ENST00000546229 AXIN1O15169 862 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 HUS1O60921 280 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 PRPF6O94906 941 aaKnown RBP13.46□□□□□ -0.25
COPS7A-221ENST00000546229 LDHAP00338 332 aaKnown RBP13.46□□□□□ -0.25
COPS7A-221ENST00000546229 CACNA2D1P54289 1103 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 PSMC1P62191 440 aaKnown RBP13.46□□□□□ -0.25
COPS7A-221ENST00000546229 MYL7Q01449 175 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 EHHADHQ08426 723 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 MESP2Q0VG99 397 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 FBXO43Q4G163 708 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 RRAGBQ5VZM2 374 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 TCEAL6Q6IPX3 200 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 SV2BQ7L1I2 683 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 GPD1LQ8N335 351 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 CSGALNACT2Q8N6G5 542 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 RPLP0P6Q8NHW5 317 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 TCEAL3Q969E4 200 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 HPS3Q969F9 1004 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 SPATA17Q96L03 361 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 PCIF1Q9H4Z3 704 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 MTMR6Q9Y217 621 aa13.46□□□□□ -0.25
COPS7A-221ENST00000546229 TRAV19A0A0A6YYK7 116 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 DCLK1O15075 740 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 TGFB1I1O43294 461 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 ATG13O75143 517 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 USP17L7P0C7H9 530 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 HNRNPLP14866 589 aaKnown RBP eCLIP13.45□□□□□ -0.26
COPS7A-221ENST00000546229 SYT1P21579 422 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 WARSP23381 471 aaKnown RBP13.45□□□□□ -0.26
COPS7A-221ENST00000546229 MPLP40238 635 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 LHX1P48742 406 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 NASPP49321 788 aaPredicted RBP13.45□□□□□ -0.26
COPS7A-221ENST00000546229 RBP5P82980 135 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 SHC2P98077 582 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 DMC1Q14565 340 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 SLC39A14Q15043 492 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 TAF12Q16514 161 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 DPH6Q7L8W6 267 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 RASSF3Q86WH2 238 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 SFTPA1Q8IWL2 248 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 CPA6Q8N4T0 437 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 ARL14EPQ8N8R7 260 aaPredicted RBP13.45□□□□□ -0.26
COPS7A-221ENST00000546229 SH3RF2Q8TEC5 729 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 CD101Q93033 1021 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 ATP2A3Q93084 1043 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 SYT15Q9BQS2 421 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 LINC00597Q9H2U6 94 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 DUS2Q9NX74 493 aaKnown RBP13.45□□□□□ -0.26
COPS7A-221ENST00000546229 CCDC39Q9UFE4 941 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 PCDHB13Q9Y5F0 798 aa13.45□□□□□ -0.26
COPS7A-221ENST00000546229 FREM2Q5SZK8 3169 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 IGF2RP11717 2491 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 K7EQS6 105 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 OAS1P00973 400 aaKnown RBP13.44□□□□□ -0.26
COPS7A-221ENST00000546229 CKMP06732 381 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 PCSK1P29120 753 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 AASDHQ4L235 1098 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-221ENST00000546229 N4BP2L1Q5TBK1 243 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-221ENST00000546229 STPG1Q5TH74 334 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 CNNM4Q6P4Q7 775 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 VSTM1Q6UX27 236 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 CCDC73Q6ZRK6 1079 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 SPATA2LQ8IUW3 424 aaPredicted RBP13.44□□□□□ -0.26
COPS7A-221ENST00000546229 ABCA7Q8IZY2 2146 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 USP33Q8TEY7 942 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 CACTINQ8WUQ7 758 aaKnown RBP13.44□□□□□ -0.26
COPS7A-221ENST00000546229 PCED1BQ96HM7 432 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 ZFRQ96KR1 1074 aaKnown RBP13.44□□□□□ -0.26
COPS7A-221ENST00000546229 CEP295NLQ96MC4 621 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 TRPC7Q9HCX4 862 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 PANK4Q9NVE7 773 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 KBTBD4Q9NVX7 518 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 CDH9Q9ULB4 789 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 SLC8A2Q9UPR5 921 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 WASF3Q9UPY6 502 aa13.44□□□□□ -0.26
COPS7A-221ENST00000546229 BCLAF3A2AJT9 711 aaKnown RBP13.43□□□□□ -0.26
COPS7A-221ENST00000546229 KIAA0391O15091 583 aaKnown RBP13.43□□□□□ -0.26
COPS7A-221ENST00000546229 APBB3O95704 486 aa13.43□□□□□ -0.26
COPS7A-221ENST00000546229 CYP17A1P05093 508 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms