RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 SPATA17Q96L03 361 aa24.29■■□□□ 1.48
CHD4-214ENST00000545942 MRPL45Q9BRJ2 306 aaKnown RBP24.29■■□□□ 1.48
CHD4-214ENST00000545942 HPSEQ9Y251 543 aa24.29■■□□□ 1.48
CHD4-214ENST00000545942 GTF3C3Q9Y5Q9 886 aa24.29■■□□□ 1.48
CHD4-214ENST00000545942 FANCMQ8IYD8 2048 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 PHACTR2O75167 634 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 TDGF1P13385 188 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 GRIK1P39086 918 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 CXCL12P48061 93 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 MYL6P60660 151 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 GAS6Q14393 721 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 PON2Q15165 354 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 CC2D1AQ6P1N0 951 aaPredicted RBP24.28■■□□□ 1.48
CHD4-214ENST00000545942 SPEM1Q8N4L4 309 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 OR6B3Q8NGW1 331 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 TMEM174Q8WUU8 243 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 PCED1BQ96HM7 432 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 XYLT2Q9H1B5 865 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 TRPC7Q9HCX4 862 aa24.28■■□□□ 1.48
CHD4-214ENST00000545942 RBM12Q9NTZ6 932 aaKnown RBP24.28■■□□□ 1.48
CHD4-214ENST00000545942 CASP4P49662 377 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 AP3M2P53677 418 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 FAM160A1Q05DH4 1040 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 RUNX3Q13761 415 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 MDH1BQ5I0G3 518 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 WDR44Q5JSH3 913 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 SLC9A9Q8IVB4 645 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 PLEKHO2Q8TD55 490 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 PARD3BQ8TEW8 1205 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 CHAMP1Q96JM3 812 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 EPC1Q9H2F5 836 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 DMAC2Q9NW81 257 aa24.27■■□□□ 1.48
CHD4-214ENST00000545942 NXF1Q9UBU9 619 aaKnown RBP24.27■■□□□ 1.48
CHD4-214ENST00000545942 GVINP1Q7Z2Y8 2422 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 TRAV19A0A0A6YYK7 116 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 USP17L7P0C7H9 530 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 ANXA13P27216 316 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 SYKP43405 635 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 CLDN10P78369 228 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 SATB1Q01826 763 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 BIRC3Q13489 604 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 DENND5BQ6ZUT9 1274 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 SYNPOQ8N3V7 929 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 KCTD10Q9H3F6 313 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 EBF3Q9H4W6 596 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 HPS4Q9NQG7 708 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 NME7Q9Y5B8 376 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 ATP6V1DQ9Y5K8 247 aa24.26■■□□□ 1.47
CHD4-214ENST00000545942 LRRIQ3A6PVS8 624 aaPredicted RBP24.25■■□□□ 1.47
CHD4-214ENST00000545942 A8MXQ7 604 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 PDXKO00764 312 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 TRIM66O15016 1216 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 RPN1P04843 607 aaKnown RBP24.25■■□□□ 1.47
CHD4-214ENST00000545942 CKMP06732 381 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 PTPN1P18031 435 aaKnown RBP24.25■■□□□ 1.47
CHD4-214ENST00000545942 CCINQ13939 588 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 TDRD10Q5VZ19 366 aaKnown RBP24.25■■□□□ 1.47
CHD4-214ENST00000545942 TRIM68Q6AZZ1 485 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 Q6ZS52 159 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 RIN3Q8TB24 985 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 SLC22A12Q96S37 553 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 CYP2S1Q96SQ9 504 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 VRTNQ9H8Y1 702 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 EHD2Q9NZN4 543 aa24.25■■□□□ 1.47
CHD4-214ENST00000545942 FAM237AA0A1B0GTK4 181 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 NDUFA8P51970 172 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 KCNB1Q14721 858 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 PDGFRLQ15198 375 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 ZNF699Q32M78 642 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 KIAA2013Q8IYS2 634 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 C8orf48Q96LL4 319 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 SCAND2PQ9GZW5 306 aaPredicted RBP24.24■■□□□ 1.47
CHD4-214ENST00000545942 DPEP3Q9H4B8 488 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 GCNT4Q9P109 453 aa24.24■■□□□ 1.47
CHD4-214ENST00000545942 SMG5Q9UPR3 1016 aaKnown RBP24.24■■□□□ 1.47
CHD4-214ENST00000545942 C2orf78A6NCI8 922 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 OTOL1A6NHN0 477 aaPredicted RBP24.23■■□□□ 1.47
CHD4-214ENST00000545942 CLSTN1O94985 981 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 PAPSS2O95340 614 aaPredicted RBP24.23■■□□□ 1.47
CHD4-214ENST00000545942 NR3C1P04150 777 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 PDE6CP51160 858 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 AMPD2Q01433 879 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 NCOA4Q13772 614 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 MTF1Q14872 753 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 ZNF77Q15935 545 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 DCLK2Q8N568 766 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 ARL14EPQ8N8R7 260 aaPredicted RBP24.23■■□□□ 1.47
CHD4-214ENST00000545942 B3GALNT2Q8NCR0 500 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 CCDC47Q96A33 483 aaKnown RBP24.23■■□□□ 1.47
CHD4-214ENST00000545942 TTLL2Q9BWV7 592 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 ELOVL4Q9GZR5 314 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 NCDNQ9UBB6 729 aa24.23■■□□□ 1.47
CHD4-214ENST00000545942 EP300Q09472 2414 aaPredicted RBP24.22■■□□□ 1.47
CHD4-214ENST00000545942 F8VP50 259 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 KIF20AO95235 890 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 C4BPAP04003 597 aaKnown RBP24.22■■□□□ 1.47
CHD4-214ENST00000545942 ARSAP15289 507 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 ID4P47928 161 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 USP46P62068 366 aa24.22■■□□□ 1.47
CHD4-214ENST00000545942 NOP14P78316 857 aaKnown RBP24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms