RNA–Protein interactions for RNA: ENST00000545686.6

TDP1-204, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 2,488 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-204ENST00000545686 SYT15Q9BQS2 421 aa9.17□□□□□ -0.94
TDP1-204ENST00000545686 WDR83Q9BRX9 315 aaKnown RBP9.17□□□□□ -0.94
TDP1-204ENST00000545686 GLIS2Q9BZE0 524 aaPredicted RBP9.17□□□□□ -0.94
TDP1-204ENST00000545686 KCNK13Q9HB14 408 aa9.17□□□□□ -0.94
TDP1-204ENST00000545686 SLC17A7Q9P2U7 560 aa9.17□□□□□ -0.94
TDP1-204ENST00000545686 SEPT9Q9UHD8 586 aaPredicted RBP9.17□□□□□ -0.94
TDP1-204ENST00000545686 PCDHGC3Q9UN70 934 aa9.17□□□□□ -0.94
TDP1-204ENST00000545686 AGTPBP1Q9UPW5 1226 aa9.17□□□□□ -0.94
TDP1-204ENST00000545686 LCTP09848 1927 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 GOLGA8SH3BPF8 625 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 GOLGA8MH3BSY2 632 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 MAGEC1O60732 1142 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 BANF1O75531 89 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 RARBP10826 455 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ESRRAP11474 423 aaPredicted RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 EIF4BP23588 611 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 SERPINB3P29508 390 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 OTUD4Q01804 1114 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 SLC25A11Q02978 314 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 NCOA4Q13772 614 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 KPNB1Q14974 876 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 RBBP5Q15291 538 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 MSS51Q4VC12 460 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ARHGEF16Q5VV41 709 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ANKRD22Q5VYY1 191 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ACTL9Q8TC94 416 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 SLC44A1Q8WWI5 657 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 RSAD2Q8WXG1 361 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 PTPRN2Q92932 1015 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 HAUS1Q96CS2 278 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 MRRFQ96E11 262 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 IFT43Q96FT9 208 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 FAM84AQ96KN4 292 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ZNF341Q9BYN7 854 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 CNTN3Q9P232 1028 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 IKBKGQ9Y6K9 419 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 DOCK1Q14185 1865 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ZNF541Q9H0D2 1346 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 CNTNAP2Q9UHC6 1331 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 KAT6AQ92794 2004 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 CLRN2A0PK11 232 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 WDR91A4D1P6 747 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ENO4A6NNW6 628 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 CAPN9O14815 690 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 SMIM24O75264 130 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ASS1P00966 412 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 MYCNP04198 464 aaPredicted RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 RPL22P35268 128 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 NAMPTP43490 491 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ACOT2P49753 483 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 SARNPP82979 210 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 ROR2Q01974 943 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 PRKCEQ02156 737 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 OVGP1Q12889 678 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 PTK7Q13308 1070 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 EMC2Q15006 297 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 TBCCQ15814 346 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 HADHQ16836 314 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 AP1ARQ63HQ0 302 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 TXNRD3NBQ6F5E7 133 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 OR52E8Q6IFG1 317 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 SH2D5Q6ZV89 423 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 TRMT1LQ7Z2T5 733 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 VSIG10LQ86VR7 867 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 SEPT12Q8IYM1 358 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 CPXCR1Q8N123 301 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 TEKT4Q8WW24 435 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 SCG3Q8WXD2 468 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 OXNAD1Q96HP4 312 aaPredicted RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 MSTO1Q9BUK6 570 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 CCDC28BQ9BUN5 200 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 FRMD8Q9BZ67 464 aaPredicted RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 RAVER2Q9HCJ3 691 aaKnown RBP9.16□□□□□ -0.94
TDP1-204ENST00000545686 PNPLA8Q9NP80 782 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 KCNK4Q9NYG8 393 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 TAS2R1Q9NYW7 299 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 DNAJB4Q9UDY4 337 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ANGPTL2Q9UKU9 493 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 ADGRA2Q96PE1 1338 aa9.16□□□□□ -0.94
TDP1-204ENST00000545686 A0A0B4J269 797 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 SPDYE5A6NIY4 337 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 YDJCA8MPS7 323 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 H0YIN7 160 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 MAP3K7O43318 606 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 STAM2O75886 525 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 KRT36O76013 467 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 TMEM63AO94886 807 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 INHBAP08476 426 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 MMP10P09238 476 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 KCNA2P16389 499 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 TUBP50607 506 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 PAPOLAP51003 745 aaKnown RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 GDF10P55107 478 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 ZNF200P98182 395 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 RCN2Q14257 317 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 XKR3Q5GH77 459 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 RSBN1LQ6PCB5 846 aaPredicted RBP9.15□□□□□ -0.94
TDP1-204ENST00000545686 LRRC6Q86X45 466 aa9.15□□□□□ -0.94
TDP1-204ENST00000545686 GALNT15Q8N3T1 639 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms