RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 OR6B3Q8NGW1 331 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 KBTBD7Q8WVZ9 684 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 MYADMQ96S97 322 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 EMILIN2Q9BXX0 1053 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 STK33Q9BYT3 514 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 FOXQ1Q9C009 403 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 GANQ9H2C0 597 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.61□□□□□ -0.39
LTBR-214ENST00000545445 MAN1C1Q9NR34 630 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 ARHGEF3Q9NR81 526 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 CISHQ9NSE2 258 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 FAM207AQ9NSI2 230 aaPredicted RBP12.61□□□□□ -0.39
LTBR-214ENST00000545445 DDX43Q9NXZ2 648 aaKnown RBP12.61□□□□□ -0.39
LTBR-214ENST00000545445 MTRRQ9UBK8 725 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 DNAJC12Q9UKB3 198 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 CDH9Q9ULB4 789 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 MYO6Q9UM54 1294 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.61□□□□□ -0.39
LTBR-214ENST00000545445 TIMM13Q9Y5L4 95 aaPredicted RBP12.61□□□□□ -0.39
LTBR-214ENST00000545445 CLUHO75153 1309 aa12.61□□□□□ -0.39
LTBR-214ENST00000545445 A8MXQ7 604 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 CILPO75339 1184 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 NOL4O94818 638 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 GLULP15104 373 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 TRIM14Q14142 442 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 SPECC1LQ69YQ0 1117 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 IQCEQ6IPM2 695 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 SLC8B1Q6J4K2 584 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 CACNA2D4Q7Z3S7 1137 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 DCP1BQ8IZD4 617 aaKnown RBP12.6□□□□□ -0.39
LTBR-214ENST00000545445 ST13P5Q8NFI4 369 aaPredicted RBP12.6□□□□□ -0.39
LTBR-214ENST00000545445 SHC3Q92529 594 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 KREMEN1Q96MU8 473 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 MRPL45Q9BRJ2 306 aaKnown RBP12.6□□□□□ -0.39
LTBR-214ENST00000545445 NT5C1AQ9BXI3 368 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 NAA15Q9BXJ9 866 aaKnown RBP12.6□□□□□ -0.39
LTBR-214ENST00000545445 SDCBP2Q9H190 292 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 NUCKS1Q9H1E3 243 aaKnown RBP12.6□□□□□ -0.39
LTBR-214ENST00000545445 GRPEL1Q9HAV7 217 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 CEP72Q9P209 647 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 NCDNQ9UBB6 729 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 EPS15L1Q9UBC2 864 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 KIAA1257Q9ULG3 409 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 MAFFQ9ULX9 164 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 CNTN6Q9UQ52 1028 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 SIT1Q9Y3P8 196 aa12.6□□□□□ -0.39
LTBR-214ENST00000545445 CFAP47Q6ZTR5 3102 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 A0A1W2PQJ5 194 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 C2CD2LO14523 706 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 ADH1AP07327 375 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 PAEPP09466 180 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 TPM1P09493 284 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 CD58P19256 250 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 ACO1P21399 889 aaKnown RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 RAP1GAPP47736 663 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 KLK7P49862 253 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 ZNF75DP51815 510 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 NDST1P52848 882 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 BPIFB4P59827 614 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 POLR2FP61218 127 aaKnown RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 GSE1Q14687 1217 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 DRAP1Q14919 205 aaPredicted RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 NFE2Q16621 373 aaPredicted RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 PRSS55Q6UWB4 352 aaPredicted RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 VSTM4Q8IW00 320 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 MAML2Q8IZL2 1156 aaPredicted RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 CRYBG2Q8N1P7 616 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 UBR7Q8N806 425 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 ZNF397Q8NF99 534 aaPredicted RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 C2orf15Q8WU43 125 aaKnown RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 ELMO3Q96BJ8 720 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 TMEM176AQ96HP8 235 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 B3GALT6Q96L58 329 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 SPAG5Q96R06 1193 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 ARID3AQ99856 593 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 WDR6Q9NNW5 1121 aaKnown RBP12.59□□□□□ -0.39
LTBR-214ENST00000545445 DPP7Q9UHL4 492 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 PCDHB4Q9Y5E5 795 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 FHOD1Q9Y613 1164 aa12.59□□□□□ -0.39
LTBR-214ENST00000545445 CCDC195A0A1B0GUA6 201 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 AP5Z1O43299 807 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 RFPL2O75678 378 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 PDGFRBP09619 1106 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 CCDC172P0C7W6 258 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 PTPN1P18031 435 aaKnown RBP12.58□□□□□ -0.4
LTBR-214ENST00000545445 LMO2P25791 158 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 STAT1P42224 750 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 ATXN1P54253 815 aaKnown RBP12.58□□□□□ -0.4
LTBR-214ENST00000545445 APBA1Q02410 837 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 GPR17Q13304 367 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 RAPGEF1Q13905 1077 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 RAB33AQ14088 237 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 ST3GAL2Q16842 350 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 ARHGAP44Q17R89 818 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 INTS6LQ5JSJ4 861 aaKnown RBP12.58□□□□□ -0.4
LTBR-214ENST00000545445 TPGS2Q68CL5 300 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 GJB7Q6PEY0 223 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 TMEM270Q6UE05 265 aa12.58□□□□□ -0.4
LTBR-214ENST00000545445 OSTM1Q86WC4 334 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms