RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 ENOSF1Q7L5Y1 443 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 WDR49Q8IV35 697 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 DCLK2Q8N568 766 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 ZBTB44Q8NCP5 570 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 C3orf58Q8NDZ4 430 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 ZNF397Q8NF99 534 aaPredicted RBP7.05□□□□□ -1.28
CDCA3-209ENST00000544610 TAF4BQ92750 862 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 NELL1Q92832 810 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 CLDN23Q96B33 292 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 UROC1Q96N76 676 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 NAP1L5Q96NT1 182 aaPredicted RBP7.05□□□□□ -1.28
CDCA3-209ENST00000544610 PANX2Q96RD6 677 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 FNBP1Q96RU3 617 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 MSTO1Q9BUK6 570 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 KIFC3Q9BVG8 833 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 EPC1Q9H2F5 836 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 TMEM8AQ9HCN3 771 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 PRMT8Q9NR22 394 aaPredicted RBP7.05□□□□□ -1.28
CDCA3-209ENST00000544610 TOPORSQ9NS56 1045 aaPredicted RBP7.05□□□□□ -1.28
CDCA3-209ENST00000544610 INTS13Q9NVM9 706 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 GDE1Q9NZC3 331 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 SIK3Q9Y2K2 1263 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 FANCMQ8IYD8 2048 aa7.05□□□□□ -1.28
CDCA3-209ENST00000544610 VWA8A3KMH1 1905 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ARHGEF37A1IGU5 675 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 SHISA7A6NL88 538 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CLIC2O15247 247 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 XPOTO43592 962 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 TRAPPC3O43617 180 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 LILRB5O75023 590 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 STAU1O95793 577 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 RHOP08100 348 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 FAM163BP0C2L3 166 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CD72P21854 359 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 FCARP24071 287 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 IGFBP6P24592 240 aaPredicted RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 TARSP26639 723 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 TKTP29401 623 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 FMO5P49326 533 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CASP4P49662 377 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CYP2J2P51589 502 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ZBED6P86452 979 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CSTF1Q05048 431 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 FZD5Q13467 585 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 DUOXA2Q1HG44 320 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ZACNQ401N2 412 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 GLRA4Q5JXX5 417 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ZBTB41Q5SVQ8 909 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 DMRTA1Q5VZB9 504 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 SLC8B1Q6J4K2 584 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CRELD2Q6UXH1 353 aaPredicted RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ZNF852Q6ZMS4 543 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 TTC39CQ8N584 583 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 GPR161Q8N6U8 529 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CACTINQ8WUQ7 758 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ING5Q8WYH8 240 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 DNASE1L2Q92874 299 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ELSPBP1Q96BH3 223 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 NELL2Q99435 816 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 TCHPQ9BT92 498 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CCDC94Q9BW85 323 aaPredicted RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 TTYH3Q9C0H2 523 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CDT1Q9H211 546 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 VPS16Q9H269 839 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 RPF1Q9H9Y2 349 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 GOLGA2P5Q9HBQ8 144 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 POLD4Q9HCU8 107 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 ZSCAN32Q9NX65 697 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 RBAKQ9NYW8 714 aaPredicted RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CEP72Q9P209 647 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 CAPN11Q9UMQ6 739 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 MRPS23Q9Y3D9 190 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 BZW2Q9Y6E2 419 aaKnown RBP7.04□□□□□ -1.28
CDCA3-209ENST00000544610 FAM186AA6NE01 2351 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 COL4A2P08572 1712 aa7.04□□□□□ -1.28
CDCA3-209ENST00000544610 MIA3Q5JRA6 1907 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 SMIM28A0A1B0GU29 152 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 TTC26A0AVF1 554 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 WDR27A2RRH5 827 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 I3L4J1 428 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 NCAM2O15394 837 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 TBC1D4O60343 1298 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 GFPT2O94808 682 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 MICAL2O94851 1124 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 ABLIM3O94929 683 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 CCDC172P0C7W6 258 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 TDGF1P13385 188 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 ATF2P15336 505 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 KCNE1P15382 129 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 CEBPBP17676 345 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 TRIM21P19474 475 aaKnown RBP7.03□□□□□ -1.28
CDCA3-209ENST00000544610 CYP3A5P20815 502 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 SDHBP21912 280 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 ATICP31939 592 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 BRCC3P46736 316 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 MXI1P50539 228 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 YARSP54577 528 aaKnown RBP7.03□□□□□ -1.28
CDCA3-209ENST00000544610 ROR1Q01973 937 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 GCNT1Q02742 428 aa7.03□□□□□ -1.28
CDCA3-209ENST00000544610 SOX4Q06945 474 aaPredicted RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms