RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 TMEM253P0C7T8 217 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 CSNK2BP67870 215 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 EMC2Q15006 297 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 DGKKQ5KSL6 1271 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 BNC2Q6ZN30 1099 aaPredicted RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 SERPINB12Q96P63 405 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 NT5C1AQ9BXI3 368 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 SH3BP1Q9Y3L3 701 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 PBLDP30039 288 aaPredicted RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 MRPL39Q9NYK5 338 aaKnown RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 WDR62O43379 1518 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 PRR23AA6NEV1 266 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 SAC3D1A6NKF1 404 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 ATP9AO75110 1047 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 CNTN1Q12860 1018 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 NAIF1Q69YI7 327 aaPredicted RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 NUDT18Q6ZVK8 323 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 PODNQ7Z5L7 613 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 VPS33BQ9H267 617 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 CHST12Q9NRB3 414 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 BIVM-ERCC5R4GMW8 1640 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 DARSP14868 501 aaKnown RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 CHRNB3Q05901 458 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 COL23A1Q86Y22 540 aaPredicted RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 CINPQ9BW66 212 aaPredicted RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 TMEM120AQ9BXJ8 343 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 IARS2Q9NSE4 1012 aaKnown RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 TNPO2O14787 897 aaKnown RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 STILQ15468 1287 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 KDM7AQ6ZMT4 941 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 ZNF333Q96JL9 665 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 GINS4Q9BRT9 223 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 REXO4Q9GZR2 422 aaKnown RBP16.01■□□□□ 0.15
CHD4-210ENST00000544040 VTA1Q9NP79 307 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 DNAJC16Q9Y2G8 782 aa16.01■□□□□ 0.15
CHD4-210ENST00000544040 KIAA0556O60303 1618 aa16■□□□□ 0.15
CHD4-210ENST00000544040 LRRIQ3A6PVS8 624 aaPredicted RBP16■□□□□ 0.15
CHD4-210ENST00000544040 AQP5P55064 265 aa16■□□□□ 0.15
CHD4-210ENST00000544040 MAGEB18Q96M61 343 aa16■□□□□ 0.15
CHD4-210ENST00000544040 PARVBQ9HBI1 364 aa16■□□□□ 0.15
CHD4-210ENST00000544040 PTPRHQ9HD43 1115 aa16■□□□□ 0.15
CHD4-210ENST00000544040 ATP10AO60312 1499 aa16■□□□□ 0.15
CHD4-210ENST00000544040 TRAPPC3O43617 180 aa16■□□□□ 0.15
CHD4-210ENST00000544040 MAPK10P53779 464 aa16■□□□□ 0.15
CHD4-210ENST00000544040 C10orf120Q5SQS8 335 aa16■□□□□ 0.15
CHD4-210ENST00000544040 TYW3Q6IPR3 259 aaKnown RBP16■□□□□ 0.15
CHD4-210ENST00000544040 MMGT1Q8N4V1 131 aa16■□□□□ 0.15
CHD4-210ENST00000544040 MIEF2Q96C03 454 aa16■□□□□ 0.15
CHD4-210ENST00000544040 MAGED4Q96JG8 741 aa16■□□□□ 0.15
CHD4-210ENST00000544040 L3MBTL3Q96JM7 780 aaPredicted RBP16■□□□□ 0.15
CHD4-210ENST00000544040 NAGPAQ9UK23 515 aa16■□□□□ 0.15
CHD4-210ENST00000544040 HPS5Q9UPZ3 1129 aa16■□□□□ 0.15
CHD4-210ENST00000544040 FYNP06241 537 aa16■□□□□ 0.15
CHD4-210ENST00000544040 THRAP10827 490 aa16■□□□□ 0.15
CHD4-210ENST00000544040 GSSP48637 474 aa16■□□□□ 0.15
CHD4-210ENST00000544040 ARMC6Q6NXE6 501 aa16■□□□□ 0.15
CHD4-210ENST00000544040 TMEM79Q9BSE2 394 aa16■□□□□ 0.15
CHD4-210ENST00000544040 EIF4ENIF1Q9NRA8 985 aaKnown RBP16■□□□□ 0.15
CHD4-210ENST00000544040 TMEM191CA6NGB0 347 aa16■□□□□ 0.15
CHD4-210ENST00000544040 CLPTM1O96005 669 aa16■□□□□ 0.15
CHD4-210ENST00000544040 NAPEPLDQ6IQ20 393 aa16■□□□□ 0.15
CHD4-210ENST00000544040 EFL1Q7Z2Z2 1120 aaKnown RBP16■□□□□ 0.15
CHD4-210ENST00000544040 MPP4Q96JB8 637 aa16■□□□□ 0.15
CHD4-210ENST00000544040 PIM2Q9P1W9 311 aa16■□□□□ 0.15
CHD4-210ENST00000544040 ZNF521Q96K83 1311 aa16■□□□□ 0.15
CHD4-210ENST00000544040 TRIM43BA6NCK2 446 aa16■□□□□ 0.15
CHD4-210ENST00000544040 APOA4P06727 396 aa16■□□□□ 0.15
CHD4-210ENST00000544040 PSMB9P28065 219 aa16■□□□□ 0.15
CHD4-210ENST00000544040 EIF2B2P49770 351 aaKnown RBP16■□□□□ 0.15
CHD4-210ENST00000544040 ITIH4Q14624 930 aa16■□□□□ 0.15
CHD4-210ENST00000544040 C16orf72Q14CZ0 275 aa16■□□□□ 0.15
CHD4-210ENST00000544040 AGAP9Q5VTM2 703 aa16■□□□□ 0.15
CHD4-210ENST00000544040 UTP6Q9NYH9 597 aaKnown RBP16■□□□□ 0.15
CHD4-210ENST00000544040 GOLGA8TH3BQL2 631 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 GPC1P35052 558 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 IL5RAQ01344 420 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 USP49Q70CQ1 688 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 SPIRE2Q8WWL2 714 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 ANKS1AQ92625 1134 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 FHDC1Q9C0D6 1143 aaPredicted RBP15.99■□□□□ 0.15
CHD4-210ENST00000544040 C6orf62Q9GZU0 229 aaPredicted RBP15.99■□□□□ 0.15
CHD4-210ENST00000544040 GPRC5DQ9NZD1 345 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 MEI4A8MW99 385 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 DGAT1O75907 488 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 NCF4Q15080 339 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 SEZ6Q53EL9 994 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 KLHDC7AQ5VTJ3 777 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 IL1RAPL1Q9NZN1 696 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 ATP6V1HQ9UI12 483 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 RPS6KL1Q9Y6S9 549 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 ZNF862O60290 1169 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 KCNT1Q5JUK3 1230 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 ATF7IP2Q5U623 682 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 SGMS1Q86VZ5 419 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 TPCN2Q8NHX9 752 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 MYCBPAPQ8TBZ2 947 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 VCPKMTQ9H867 229 aa15.99■□□□□ 0.15
CHD4-210ENST00000544040 EIF2S1P05198 315 aaKnown RBP15.99■□□□□ 0.15
CHD4-210ENST00000544040 BAATQ14032 418 aaPredicted RBP15.99■□□□□ 0.15
CHD4-210ENST00000544040 CCSER1Q9C0I3 900 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms