RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 CD300LGQ6UXG3 332 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 IFT20Q8IY31 132 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 EMC1Q8N766 993 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 EXD1Q8NHP7 514 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 CCDC26Q8TAB7 109 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 SLC2A14Q8TDB8 520 aa20.89■□□□□ 0.93
COPS7A-218ENST00000543939 HNRNPABQ99729 332 aaKnown RBP20.89■□□□□ 0.93
COPS7A-218ENST00000543939 BHMG1C9JSJ3 638 aaPredicted RBP20.88■□□□□ 0.93
COPS7A-218ENST00000543939 PIK3R2O00459 728 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 PHF2O75151 1096 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 CAPN15O75808 1086 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 PAX3P23760 479 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 ACAT1P24752 427 aaKnown RBP20.88■□□□□ 0.93
COPS7A-218ENST00000543939 SNX16P57768 344 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 GUCY2DQ02846 1103 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 CYP1B1Q16678 543 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 MAP9Q49MG5 647 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 KIAA0319Q5VV43 1072 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 ARFGAP1Q8N6T3 406 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 FUT8Q9BYC5 575 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 EPB41L5Q9HCM4 733 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 CYLDQ9NQC7 956 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 DDX43Q9NXZ2 648 aaKnown RBP20.88■□□□□ 0.93
COPS7A-218ENST00000543939 AMACRQ9UHK6 382 aa20.88■□□□□ 0.93
COPS7A-218ENST00000543939 ZSCAN5CA6NGD5 496 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-218ENST00000543939 PITPNM1O00562 1244 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 RARAP10276 462 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 CLLU1OSQ5K130 101 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 GLB1LQ6UWU2 654 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 OLFML1Q6UWY5 402 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 MAATS1Q7Z4T9 603 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 FUKQ8N0W3 1084 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 PIWIL1Q96J94 861 aaKnown RBP20.87■□□□□ 0.93
COPS7A-218ENST00000543939 PLEKHA4Q9H4M7 779 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.87■□□□□ 0.93
COPS7A-218ENST00000543939 MTUS1Q9ULD2 1270 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 PAPSS1O43252 624 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-218ENST00000543939 B3GAT3O94766 335 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 GJC1P36383 396 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 ACAP1Q15027 740 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 CCDC142Q17RM4 750 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 ATP13A4Q4VNC1 1196 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 PLEKHG4Q58EX7 1191 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 ZDHHC17Q8IUH5 632 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 GSPT2Q8IYD1 628 aaKnown RBP20.87■□□□□ 0.93
COPS7A-218ENST00000543939 SPATA18Q8TC71 538 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 HERPUD2Q9BSE4 406 aa20.87■□□□□ 0.93
COPS7A-218ENST00000543939 TIMM13Q9Y5L4 95 aaPredicted RBP20.87■□□□□ 0.93
COPS7A-218ENST00000543939 BRCA2P51587 3418 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 TANC1Q9C0D5 1861 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 C2CD4BA6NLJ0 364 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 LRCH4O75427 683 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 ODC1P11926 461 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 CHRNA3P32297 505 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 PLA2G4AP47712 749 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 ZNF143P52747 638 aaPredicted RBP20.86■□□□□ 0.93
COPS7A-218ENST00000543939 SLC6A3Q01959 620 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 SLC25A11Q02978 314 aaKnown RBP20.86■□□□□ 0.93
COPS7A-218ENST00000543939 TXNRD3NBQ6F5E7 133 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 TRNP1Q6NT89 227 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 PAQR9Q6ZVX9 377 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 POLNQ7Z5Q5 900 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 RCOR2Q8IZ40 523 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 C12orf50Q8NA57 414 aaPredicted RBP20.86■□□□□ 0.93
COPS7A-218ENST00000543939 AENQ8WTP8 325 aaKnown RBP20.86■□□□□ 0.93
COPS7A-218ENST00000543939 CASKIN2Q8WXE0 1202 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 KHSRPQ92945 711 aaKnown RBP eCLIP20.86■□□□□ 0.93
COPS7A-218ENST00000543939 HSFY1Q96LI6 401 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 SYT15Q9BQS2 421 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 DUSP16Q9BY84 665 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 CRTAC1Q9NQ79 661 aa20.86■□□□□ 0.93
COPS7A-218ENST00000543939 TET1Q8NFU7 2136 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 M0QZQ0 153 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 XPO1O14980 1071 aaKnown RBP20.85■□□□□ 0.93
COPS7A-218ENST00000543939 TTI1O43156 1089 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 SASH3O75995 380 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 CYP11A1P05108 521 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 COL6A1P12109 1028 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 GPD1P21695 349 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 BRCC3P46736 316 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 MDH1BQ5I0G3 518 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 NOMO2Q5JPE7 1267 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 DCLRE1AQ6PJP8 1040 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 FAM43BQ6ZT52 329 aaPredicted RBP20.85■□□□□ 0.93
COPS7A-218ENST00000543939 CCDC50Q8IVM0 306 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 SCUBE3Q8IX30 993 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 DBF4BQ8NFT6 615 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 MAIP1Q8WWC4 291 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 MAGOHBQ96A72 148 aaKnown RBP20.85■□□□□ 0.93
COPS7A-218ENST00000543939 RBM41Q96IZ5 413 aaKnown RBP20.85■□□□□ 0.93
COPS7A-218ENST00000543939 CNPY3Q9BT09 278 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 DDX56Q9NY93 547 aaKnown RBP20.85■□□□□ 0.93
COPS7A-218ENST00000543939 PCYOX1Q9UHG3 505 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 CDH9Q9ULB4 789 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 CEP350Q5VT06 3117 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 SCN5AQ14524 2016 aa20.85■□□□□ 0.93
COPS7A-218ENST00000543939 ESYT3A0FGR9 886 aa20.84■□□□□ 0.93
COPS7A-218ENST00000543939 I3L4J1 428 aa20.84■□□□□ 0.93
COPS7A-218ENST00000543939 PQBP1O60828 265 aaKnown RBP20.84■□□□□ 0.93
COPS7A-218ENST00000543939 RALAP11233 206 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms