RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 SKIDA1Q1XH10 827 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 FBXO47Q5MNV8 452 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 PPP1R26Q5T8A7 1209 aaPredicted RBP17.94■□□□□ 0.46
PTPRO-209ENST00000543886 RHBDF2Q6PJF5 856 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 TRMT10CQ7L0Y3 403 aaKnown RBP17.94■□□□□ 0.46
PTPRO-209ENST00000543886 CROCCP2Q86T23 111 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 UNC93AQ86WB7 457 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 ARFGAP1Q8N6T3 406 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 FAM49BQ9NUQ9 324 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 RNF19AQ9NV58 838 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 HESX1Q9UBX0 185 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 DNPEPQ9ULA0 475 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 SMIM28A0A1B0GU29 152 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 PIK3R2O00459 728 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 TP73O15350 636 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 RIPK2O43353 540 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 DUSP11O75319 330 aaKnown RBP17.94■□□□□ 0.46
PTPRO-209ENST00000543886 PFKMP08237 780 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 GPD1P21695 349 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 IL1R2P27930 398 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 UBXN11Q5T124 520 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 TTC19Q6DKK2 380 aaPredicted RBP17.94■□□□□ 0.46
PTPRO-209ENST00000543886 TAF2Q6P1X5 1199 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 FAM183BPQ6ZVS7 135 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 NOVA2Q9UNW9 492 aaKnown RBP17.94■□□□□ 0.46
PTPRO-209ENST00000543886 EFR3BQ9Y2G0 817 aa17.94■□□□□ 0.46
PTPRO-209ENST00000543886 C3orf70A6NLC5 250 aaPredicted RBP17.93■□□□□ 0.46
PTPRO-209ENST00000543886 M0QZ92 97 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 EIF3HO15372 352 aaKnown RBP eCLIP17.93■□□□□ 0.46
PTPRO-209ENST00000543886 SETSIPP0DME0 302 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 KCNE1P15382 129 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 HOXC8P31273 242 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 PNPLA4P41247 253 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 RGS7P49802 495 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 ZNF143P52747 638 aaPredicted RBP17.93■□□□□ 0.46
PTPRO-209ENST00000543886 KCNT1Q5JUK3 1230 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 IZUMO3Q5VZ72 239 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 SESTD1Q86VW0 696 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 HAUS1Q96CS2 278 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 DNAI2Q9GZS0 605 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 PCSK1NQ9UHG2 260 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 IPPQ9Y573 584 aa17.93■□□□□ 0.46
PTPRO-209ENST00000543886 A8MXQ7 604 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 PIRO00625 290 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 KDELR1P24390 212 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 KLRC2P26717 231 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 MIPP30301 263 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 SNX16P57768 344 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 SOWAHAQ2M3V2 549 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 TWF2Q6IBS0 349 aaKnown RBP17.92■□□□□ 0.46
PTPRO-209ENST00000543886 KCTD6Q8NC69 237 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 CNPY3Q9BT09 278 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 MTG1Q9BT17 334 aaPredicted RBP17.92■□□□□ 0.46
PTPRO-209ENST00000543886 USP18Q9UMW8 372 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 DRG1Q9Y295 367 aaKnown RBP17.92■□□□□ 0.46
PTPRO-209ENST00000543886 GRIN2DO15399 1336 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 MYADML2A6NDP7 307 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 PDGFRAP16234 1089 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 PCK1P35558 622 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 CHKAP35790 457 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 VCPP55072 806 aaKnown RBP17.92■□□□□ 0.46
PTPRO-209ENST00000543886 PLCB3Q01970 1234 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 XKR4Q5GH76 650 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 GNASQ5JWF2 1037 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 TTC30AQ86WT1 665 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 ALLCQ8N6M5 410 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 TRPV1Q8NER1 839 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 HSPH1Q92598 858 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 RNF39Q9H2S5 420 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 CDC42EP4Q9H3Q1 356 aaKnown RBP17.92■□□□□ 0.46
PTPRO-209ENST00000543886 AAASQ9NRG9 546 aa17.92■□□□□ 0.46
PTPRO-209ENST00000543886 KPNA7A9QM74 516 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 TRUB2O95900 331 aaKnown RBP17.91■□□□□ 0.46
PTPRO-209ENST00000543886 CTGFP29279 349 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 MAGOHP61326 146 aaKnown RBP17.91■□□□□ 0.46
PTPRO-209ENST00000543886 DYNLT1P63172 113 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 P3H1Q32P28 736 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 SV2CQ496J9 727 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 PKDCCQ504Y2 493 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 MFSD14CQ5VZR4 134 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 TTC13Q8NBP0 860 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 UHMK1Q8TAS1 419 aaKnown RBP17.91■□□□□ 0.46
PTPRO-209ENST00000543886 RXFP2Q8WXD0 754 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 NKD2Q969F2 451 aaPredicted RBP17.91■□□□□ 0.46
PTPRO-209ENST00000543886 FRMD8P1Q9BZ68 369 aaPredicted RBP17.91■□□□□ 0.46
PTPRO-209ENST00000543886 SNX25Q9H3E2 840 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 LRRC4CQ9HCJ2 640 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 NME7Q9Y5B8 376 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 TLDC2A0PJX2 215 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 SMIM23A6NLE4 172 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 C2CD4BA6NLJ0 364 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 FAM155AB1AL88 458 aaPredicted RBP17.91■□□□□ 0.46
PTPRO-209ENST00000543886 CAND2O75155 1236 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 ITGAVP06756 1048 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 TAF6P49848 677 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 FCGRTP55899 365 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 MRPS6P82932 125 aaKnown RBP17.91■□□□□ 0.46
PTPRO-209ENST00000543886 GUCY1A3Q02108 690 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 ARHGAP17Q68EM7 881 aa17.91■□□□□ 0.46
PTPRO-209ENST00000543886 PMF1Q6P1K2 205 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms