RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 NOA1Q8NC60 698 aaKnown RBP9.27□□□□□ -0.92
VPS13D-212ENST00000543766 KIAA1586Q9HCI6 787 aa9.27□□□□□ -0.92
VPS13D-212ENST00000543766 POLD4Q9HCU8 107 aa9.27□□□□□ -0.92
VPS13D-212ENST00000543766 CPNE7Q9UBL6 633 aa9.27□□□□□ -0.92
VPS13D-212ENST00000543766 WARS2Q9UGM6 360 aaKnown RBP9.27□□□□□ -0.92
VPS13D-212ENST00000543766 PXDNLA1KZ92 1463 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 DCTN3O75935 186 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 GSK3AP49840 483 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 HK2P52789 917 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 PTH1RQ03431 593 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 RELAQ04206 551 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 SULT2A1Q06520 285 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 SPAG1Q07617 926 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 DRP2Q13474 957 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 RIPK1Q13546 671 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 PDIA6Q15084 440 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 KCNT1Q5JUK3 1230 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 LSMEM2Q8N112 164 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 EFHBQ8N7U6 833 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 ZBTB44Q8NCP5 570 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 LINS1Q8NG48 757 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 COG1Q8WTW3 980 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 SCFD2Q8WU76 684 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 FRMD6Q96NE9 622 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 CDK5RAP1Q96SZ6 601 aaKnown RBP9.27□□□□□ -0.93
VPS13D-212ENST00000543766 HGH1Q9BTY7 390 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 APOL6Q9BWW8 343 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 KLHL25Q9H0H3 589 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 ELAC1Q9H777 363 aaKnown RBP9.27□□□□□ -0.93
VPS13D-212ENST00000543766 EBF2Q9HAK2 575 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 ZSWIM5Q9P217 1185 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 TBC1D14Q9P2M4 693 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 GPR34Q9UPC5 381 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 CYP46A1Q9Y6A2 500 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 SBNO1A3KN83 1393 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 SLC9B1P1A6NJY1 282 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 F6X3S4 739 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 MICAL2O94851 1124 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 VAV1P15498 845 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 KCNA3P22001 575 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 ATP11AP98196 1134 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 NCF4Q15080 339 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 ZACNQ401N2 412 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 MCMDC2Q4G0Z9 681 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 PLBD1Q6P4A8 553 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 TAS2R42Q7RTR8 314 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 ATP8B4Q8TF62 1192 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 TNKS2Q9H2K2 1166 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 RUBCNLQ9H714 662 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 COG4Q9H9E3 785 aa9.27□□□□□ -0.93
VPS13D-212ENST00000543766 TRNAU1APQ9NX07 287 aaKnown RBP9.27□□□□□ -0.93
VPS13D-212ENST00000543766 SOWAHDA6NJG2 315 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 SERPINB7O75635 380 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 FGF18O76093 207 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 CHGBP05060 677 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 FECHP22830 423 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 GSSP48637 474 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 CLDN10P78369 228 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 ATP8B2P98198 1209 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 ZNF45Q02386 682 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 HAUS3Q68CZ6 603 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 SLC22A25Q6T423 547 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 KDM7AQ6ZMT4 941 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 SPOCD1Q6ZMY3 1216 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 TMC8Q8IU68 726 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 Q8NFD4 153 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 GIPC3Q8TF64 312 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 TSPEARQ8WU66 669 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 CITED4Q96RK1 184 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 GRID1Q9ULK0 1009 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 HPS5Q9UPZ3 1129 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 DGKBQ9Y6T7 804 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 TXNL1O43396 289 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 GAP43P17677 238 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 MAPK8P45983 427 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 ZNF33BQ06732 778 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 MAP2K5Q13163 448 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 IKBKEQ14164 716 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 FAM47CQ5HY64 1035 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 GNASQ5JWF2 1037 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 MEX3BQ6ZN04 569 aaKnown RBP9.26□□□□□ -0.93
VPS13D-212ENST00000543766 SPATA24Q86W54 205 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 SCUBE3Q8IX30 993 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 TM9SF2Q99805 663 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 CHCHD6Q9BRQ6 235 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 ZNF717Q9BY31 904 aaPredicted RBP9.26□□□□□ -0.93
VPS13D-212ENST00000543766 TRIM39Q9HCM9 518 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 CYP26B1Q9NR63 512 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 PAQR5Q9NXK6 330 aaPredicted RBP9.26□□□□□ -0.93
VPS13D-212ENST00000543766 IL20Q9NYY1 176 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 WDR91A4D1P6 747 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 PDE8AO60658 829 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 CYP2A6P11509 494 aaPredicted RBP9.26□□□□□ -0.93
VPS13D-212ENST00000543766 TAGLN2P37802 199 aaKnown RBP9.26□□□□□ -0.93
VPS13D-212ENST00000543766 MAPKAPK2P49137 400 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 RAB14P61106 215 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 MAP3K21Q5TCX8 1036 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 NIM1KQ8IY84 436 aa9.26□□□□□ -0.93
VPS13D-212ENST00000543766 SRRM1Q8IYB3 904 aaKnown RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms