RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 PKP3Q9Y446 797 aa7.19□□□□□ -1.26
SRGAP1-206ENST00000543397 MAP3K13O43283 966 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CST8O60676 142 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 RBP3P10745 1247 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 NR1D1P20393 614 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 STARD3Q14849 445 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TBCCQ15814 346 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM110CQ1W6H9 321 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 MDH1BQ5I0G3 518 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 MTHFD1LQ6UB35 978 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ZPBP2Q6X784 338 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ACAD11Q709F0 780 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CHP1Q99653 195 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 IGFLR1Q9H665 355 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 OLFML3Q9NRN5 406 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PLA2G4CQ9UP65 541 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TIMM13Q9Y5L4 95 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CCDC78A2IDD5 438 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 SPDYE5A6NIY4 337 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 H0Y3Z8 333 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CFLARO15519 480 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PRPF4O43172 522 aaKnown RBP eCLIP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TMEM253P0C7T8 217 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CKBP12277 381 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 DDX5P17844 614 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CCL23P55773 120 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 MYL6P60660 151 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 NTRK3Q16288 839 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PKN1Q16512 942 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CELF3Q5SZQ8 465 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CES5AQ6NT32 575 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TRIM65Q6PJ69 517 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 OTOP1Q7RTM1 612 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ELOA2Q8IYF1 753 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC5A5Q92911 643 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TRIM45Q9H8W5 580 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CHST12Q9NRB3 414 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 MAPK13O15264 365 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CTIFO43310 598 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 LZTS3O60299 673 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 IL33O95760 270 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 AGR2O95994 175 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 HMGCRP04035 888 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 SERPIND1P05546 499 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 GRK4P32298 578 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 KPNA1P52294 538 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PMS2P54278 862 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 MAP3K7CLP57077 242 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CYP24A1Q07973 514 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PPM1LQ5SGD2 360 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 NUGGCQ68CJ6 796 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PTRHD1Q6GMV3 140 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 SLC25A41Q8N5S1 370 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CALML6Q8TD86 181 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 SPIRE2Q8WWL2 714 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PTPRN2Q92932 1015 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CDK5RAP1Q96SZ6 601 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 FBXO44Q9H4M3 255 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 Q9H521 79 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CASS4Q9NQ75 786 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TLR8Q9NR97 1041 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 KBTBD4Q9NVX7 518 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 VPS28Q9UK41 221 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 GTF3C4Q9UKN8 822 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PCDHGB4Q9UN71 923 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 GTF2A1LQ9UNN4 478 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PLAAQ9Y263 795 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 STX7O15400 261 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ATMINO43313 823 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 WEE1P30291 646 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 RGS4P49798 205 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 FBXW4P57775 412 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PTPAQ15257 358 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TTC39BQ5VTQ0 682 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 NAPEPLDQ6IQ20 393 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TRIM48Q8IWZ4 208 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CARNMT1Q8N4J0 409 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 SPDL1Q96EA4 605 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 IRF2BPLQ9H1B7 796 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 STN1Q9H668 368 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PAPOLBQ9NRJ5 636 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ARHGEF38Q9NXL2 777 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PAK5Q9P286 719 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CRLS1Q9UJA2 301 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 BAZ2BQ9UIF8 2168 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 UMODL1Q5DID0 1318 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ZNF541Q9H0D2 1346 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ESYT3A0FGR9 886 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 FAM47DPA6NHR8 397 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 ZBTB48P10074 688 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 PTPN11Q06124 597 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 BYSLQ13895 437 aaKnown RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 CASP8Q14790 479 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 MUM1Q2TAK8 710 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 SYDE1Q6ZW31 735 aaPredicted RBP7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 NECAB2Q7Z6G3 386 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 OOSP2Q86WS3 158 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 RELL1Q8IUW5 271 aa7.18□□□□□ -1.26
SRGAP1-206ENST00000543397 TAS1R2Q8TE23 839 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms