RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 FCF1Q9Y324 198 aaKnown RBP5.2□□□□□ -1.58
LIMS1-214ENST00000542845 PPME1Q9Y570 386 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 ASB3Q9Y575 518 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 WNT6Q9Y6F9 365 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 CELSR3Q9NYQ7 3312 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 GON4LQ3T8J9 2241 aa5.2□□□□□ -1.58
LIMS1-214ENST00000542845 PCDH15Q96QU1 1955 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 TEX51A0A1B0GUA7 166 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 B8ZZF3 427 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 SGK1O00141 431 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 SLC27A2O14975 620 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 PRPF3O43395 683 aaKnown RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 TLX3O43711 291 aaPredicted RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 SLC37A4O43826 429 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 NDUFS2O75306 463 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 DGAT1O75907 488 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 SLITRK3O94933 977 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 HARSP12081 509 aaKnown RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 ATP2B1P20020 1258 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 WASP42768 502 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CLDN6P56747 220 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 DMP1Q13316 513 aaPredicted RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 PPP2R5CQ13362 524 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 HDAC1Q13547 482 aaPredicted RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 VEPH1Q14D04 833 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 PDGFRLQ15198 375 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 INF2Q27J81 1249 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 MGAT5BQ3V5L5 792 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 COLEC12Q5KU26 742 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CENPPQ6IPU0 288 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 ARMCX5Q6P1M9 558 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 DHRS13Q6UX07 377 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 DSTYKQ6XUX3 929 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 DNAJC14Q6Y2X3 702 aaPredicted RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 RABEPKQ7Z6M1 372 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 FMNL3Q8IVF7 1028 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CEP120Q8N960 986 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 TRIML1Q8N9V2 468 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 STKLD1Q8NE28 680 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CCDC148Q8NFR7 591 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CCDC26Q8TAB7 109 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 RIN3Q8TB24 985 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 DEPTORQ8TB45 409 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 NAF1Q96HR8 494 aaKnown RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 SUSD3Q96L08 255 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 HSPA12BQ96MM6 686 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 ZMAT2Q96NC0 199 aaKnown RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 ACAP3Q96P50 834 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CYP2S1Q96SQ9 504 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CCDC94Q9BW85 323 aaPredicted RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 SLC26A6Q9BXS9 759 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 MIR1-1HGQ9H1L0 117 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 LINC00597Q9H2U6 94 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 FZD8Q9H461 694 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 GAREM1Q9H706 876 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 SLC38A7Q9NVC3 462 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 KIAA1522Q9P206 1035 aaPredicted RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 NXF1Q9UBU9 619 aaKnown RBP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 MAFFQ9ULX9 164 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 CYP8B1Q9UNU6 501 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.19□□□□□ -1.58
LIMS1-214ENST00000542845 ACACAQ13085 2346 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 DENND4CQ5VZ89 1909 aa5.19□□□□□ -1.58
LIMS1-214ENST00000542845 ANK1P16157 1881 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 CYP3A7-CYP3A51PA0A087WV96 503 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 MTMR11A4FU01 709 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 ACKR2O00590 384 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SGSM2O43147 1006 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 ZBTB24O43167 697 aaPredicted RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 CCNT1O60563 726 aaKnown RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 CBFA2T3O75081 653 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 GJB3O75712 270 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 BAG4O95429 457 aaKnown RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 S1PR4O95977 384 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 NTRK1P04629 796 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 EDN1P05305 212 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 JUPP14923 745 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 GNSP15586 552 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 ZNF16P17020 682 aaPredicted RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 CYP3A7P24462 503 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 WEE1P30291 646 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 RPL9P32969 192 aaKnown RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 HOXD12P35452 270 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SLC6A11P48066 632 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 MRPS21P82921 87 aaKnown RBP5.18□□□□□ -1.58
LIMS1-214ENST00000542845 NUCB1Q02818 461 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 KDSRQ06136 332 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SPAG1Q07617 926 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 GRIK2Q13002 908 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 GPR17Q13304 367 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 MTF1Q14872 753 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 DCAF4L1Q3SXM0 396 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SLC39A12Q504Y0 691 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SEZ6Q53EL9 994 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SPDYCQ5MJ68 293 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 EOGTQ5NDL2 527 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 SYCP2LQ5T4T6 812 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 C6orf118Q5T5N4 469 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 ARHGAP40Q5TG30 622 aa5.18□□□□□ -1.58
LIMS1-214ENST00000542845 ATF7IP2Q5U623 682 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms