RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 KRT1P04264 644 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ZSCAN5DPP0CG00 497 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EZRP15311 586 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PECAM1P16284 738 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PTPRAP18433 802 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EIF4BP23588 611 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 RPS12P25398 132 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ARSEP51690 589 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 YARSP54577 528 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SF3A3Q12874 501 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CBLBQ13191 982 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 MOGSQ13724 837 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PIGHQ14442 188 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TMED2Q15363 201 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PDK4Q16654 411 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 WDR72Q3MJ13 1102 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TFDP3Q5H9I0 405 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EFHC2Q5JST6 749 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CATSPERGQ6ZRH7 1159 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SEPT14Q6ZU15 432 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 POLNQ7Z5Q5 900 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TRIM50Q86XT4 487 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TMEM35BQ8NCS4 154 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 DEPTORQ8TB45 409 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TCP11Q8WWU5 503 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PRCCQ92733 491 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 PCYT2Q99447 389 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 DHRS4Q9BTZ2 278 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 MSTO1Q9BUK6 570 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TEX13BQ9BXU2 312 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CXorf56Q9H5V9 222 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ACAD9Q9H845 621 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 RRAGCQ9HB90 399 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 AS3MTQ9HBK9 375 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CYLDQ9NQC7 956 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 ZNF302Q9NR11 478 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 KLHL14Q9P2G3 628 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 TBK1Q9UHD2 729 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 EGFL7Q9UHF1 273 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SCAF8Q9UPN6 1271 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SMG5Q9UPR3 1016 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SNCAIPQ9Y6H5 919 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 SBF1O95248 1867 aa5.47□□□□□ -1.53
ATPAF1-212ENST00000542495 WDR90Q96KV7 1748 aa5.46□□□□□ -1.53
ATPAF1-212ENST00000542495 GSTTP1A0A1W2PQM5 241 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 LRRIQ4A6NIV6 560 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 E7ESA3 106 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 F8VP50 259 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 MSCO60682 206 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 EDF1O60869 148 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 MAFO75444 373 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ATP5HO75947 161 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 UNC5CO95185 931 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CST3P01034 146 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 KRT16P08779 473 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ETS1P14921 441 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 TCF3P15923 654 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 TSHRP16473 764 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CCND1P24385 295 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ELF1P32519 619 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 GPX6P59796 221 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 IRX3P78415 501 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC25A11Q02978 314 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 GPS1Q13098 491 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CAPSQ13938 189 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 SPARCL1Q14515 664 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 FASTKD3Q14CZ7 662 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ZKSCAN8Q15776 578 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 PKN2Q16513 984 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 PARP6Q2NL67 630 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 NBPF12Q5TAG4 269 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 DCAF15Q66K64 600 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CDCA2Q69YH5 1023 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 TXNRD3NBQ6F5E7 133 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CYP4F22Q6NT55 531 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 DNAJC24Q6P3W2 148 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CENPUQ71F23 418 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 GSTA5Q7RTV2 222 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 PCGF5Q86SE9 256 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 PNMA8AQ86V59 439 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CEP57Q86XR8 500 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ZNF276Q8N554 614 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 SMC1BQ8NDV3 1235 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 ARMC2Q8NEN0 867 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 DNERQ8NFT8 737 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 FNIP1Q8TF40 1166 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 MZB1Q8WU39 189 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 SLC7A3Q8WY07 619 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 TFAP2BQ92481 460 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 KLHL29Q96CT2 875 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 KLRG1Q96E93 195 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 MCEEQ96PE7 176 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 TMEM237Q96Q45 408 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 PITPNM3Q9BZ71 974 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 NIF3L1Q9GZT8 377 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 XYLT2Q9H1B5 865 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 LRMDAQ9H2I8 198 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 TRABDQ9H4I3 376 aa5.46□□□□□ -1.54
ATPAF1-212ENST00000542495 CISHQ9NSE2 258 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms