RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 STRA6Q9BX79 667 aa16.55■□□□□ 0.24
RTN3-211ENST00000542238 GDAP2Q9NXN4 497 aa16.55■□□□□ 0.24
RTN3-211ENST00000542238 TBC1D7Q9P0N9 293 aa16.55■□□□□ 0.24
RTN3-211ENST00000542238 WNT6Q9Y6F9 365 aa16.55■□□□□ 0.24
RTN3-211ENST00000542238 THADAQ6YHU6 1953 aa16.55■□□□□ 0.24
RTN3-211ENST00000542238 CAVIN2O95810 425 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 TMEM191BP0C7N4 346 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 HDCP19113 662 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 TXLNAP40222 546 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 DGKEP52429 567 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 KCNA1Q09470 495 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 MYO1EQ12965 1108 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 USP4Q13107 963 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 EML3Q32P44 896 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 C4orf50Q6ZRC1 276 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 C11orf74Q86VG3 221 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 ARL14EPQ8N8R7 260 aaPredicted RBP16.54■□□□□ 0.24
RTN3-211ENST00000542238 TSTD1Q8NFU3 115 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 SH3RF2Q8TEC5 729 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 SLC22A12Q96S37 553 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 PKMYT1Q99640 499 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 EDEM2Q9BV94 578 aa16.54■□□□□ 0.24
RTN3-211ENST00000542238 BCLAF3A2AJT9 711 aaKnown RBP16.53■□□□□ 0.24
RTN3-211ENST00000542238 DCLK1O15075 740 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 NFATC1O95644 943 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 MAGEA11P43364 429 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 WNT7BP56706 349 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 ALCAMQ13740 583 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 USP39Q53GS9 565 aaKnown RBP16.53■□□□□ 0.24
RTN3-211ENST00000542238 TCEAL6Q6IPX3 200 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 USP49Q70CQ1 688 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 ABCA7Q8IZY2 2146 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 TCEAL3Q969E4 200 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 OLFML3Q9NRN5 406 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 GCNT4Q9P109 453 aa16.53■□□□□ 0.24
RTN3-211ENST00000542238 MAGEC2Q9UBF1 373 aaPredicted RBP16.53■□□□□ 0.24
RTN3-211ENST00000542238 GOLGA8IPA6NC78 632 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 C2orf78A6NCI8 922 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 MYMKA6NI61 221 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 GOLGA8JA6NMD2 632 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 GABRDO14764 452 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 CD2BP2O95400 341 aaKnown RBP16.52■□□□□ 0.24
RTN3-211ENST00000542238 IDEP14735 1019 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 TCF3P15923 654 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 MAPRE1Q15691 268 aaKnown RBP16.52■□□□□ 0.24
RTN3-211ENST00000542238 SOWAHAQ2M3V2 549 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 DAB2IPQ5VWQ8 1189 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 PSAPL1Q6NUJ1 521 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 DPH6Q7L8W6 267 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 OSTM1Q86WC4 334 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 ZSWIM2Q8NEG5 633 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 CXorf38Q8TB03 319 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 EZH1Q92800 747 aaPredicted RBP16.52■□□□□ 0.24
RTN3-211ENST00000542238 DNAJC19Q96DA6 116 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 ANKRD36BP1Q96IX9 119 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 CEP295NLQ96MC4 621 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 MTMR12Q9C0I1 747 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 PDE11AQ9HCR9 933 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 EHD2Q9NZN4 543 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 ARHGAP26Q9UNA1 814 aa16.52■□□□□ 0.24
RTN3-211ENST00000542238 C4orf47A7E2U8 309 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 TNNC2P02585 160 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 PFKLP17858 780 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 ANXA13P27216 316 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 GRIK1P39086 918 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 NOVA1P51513 510 aaKnown RBP16.51■□□□□ 0.23
RTN3-211ENST00000542238 C2orf27AQ580R0 203 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 FAM171BQ6P995 826 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 VSTM1Q6UX27 236 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 GPD1LQ8N335 351 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 SPATA17Q96L03 361 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 SYT15Q9BQS2 421 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 CBWD1Q9BRT8 395 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 LINC00597Q9H2U6 94 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 PCIF1Q9H4Z3 704 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 UPF2Q9HAU5 1272 aaKnown RBP16.51■□□□□ 0.23
RTN3-211ENST00000542238 TRPM5Q9NZQ8 1165 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 SIX4Q9UIU6 781 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 CDH9Q9ULB4 789 aa16.51■□□□□ 0.23
RTN3-211ENST00000542238 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
RTN3-211ENST00000542238 KHNYNO15037 678 aaKnown RBP16.5■□□□□ 0.23
RTN3-211ENST00000542238 KIAA0391O15091 583 aaKnown RBP16.5■□□□□ 0.23
RTN3-211ENST00000542238 HCRTO43612 131 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 SEC13P55735 322 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 SURF1Q15526 300 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 CCDC142Q17RM4 750 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 PMS2CLQ68D20 193 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 CCDC73Q6ZRK6 1079 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 USP33Q8TEY7 942 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 HPDLQ96IR7 371 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 TPSD1Q9BZJ3 242 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 INTS13Q9NVM9 706 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 INVSQ9Y283 1065 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 SRPRBQ9Y5M8 271 aaKnown RBP16.5■□□□□ 0.23
RTN3-211ENST00000542238 CLIC4Q9Y696 253 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 PTPRDP23468 1912 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 LAMA1P25391 3075 aa16.5■□□□□ 0.23
RTN3-211ENST00000542238 LEFTY2O00292 366 aa16.49■□□□□ 0.23
RTN3-211ENST00000542238 ATP2C2O75185 946 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms