RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 PIAS3Q9Y6X2 628 aa23.55■■□□□ 1.36
C2CD3-216ENST00000541922 ARNTLO00327 626 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 SMC2O95347 1197 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 PSMC2P35998 433 aaKnown RBP23.54■■□□□ 1.36
C2CD3-216ENST00000541922 CDH8P55286 799 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 ZCWPW2Q504Y3 356 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 TXNDC8Q6A555 127 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 SCARA5Q6ZMJ2 495 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 MON1AQ86VX9 555 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 B3GALNT2Q8NCR0 500 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 TAF4BQ92750 862 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 ELMO3Q96BJ8 720 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 SPATA17Q96L03 361 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 CEP295NLQ96MC4 621 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 TIGD1Q96MW7 591 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 GSDMAQ96QA5 445 aa23.54■■□□□ 1.36
C2CD3-216ENST00000541922 SMG9Q9H0W8 520 aaKnown RBP23.54■■□□□ 1.36
C2CD3-216ENST00000541922 SHISA7A6NL88 538 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 TRIM66O15016 1216 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 PIK3CAP42336 1068 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 MAGEA9P43362 315 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 RAP1GAPP47736 663 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 EDRF1Q3B7T1 1238 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 C1orf220Q5T0J3 134 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 C1orf210Q8IVY1 113 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 FAM3CQ92520 227 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 SMARCE1Q969G3 411 aa23.53■■□□□ 1.36
C2CD3-216ENST00000541922 THG1LQ9NWX6 298 aaKnown RBP23.53■■□□□ 1.36
C2CD3-216ENST00000541922 NDRG2Q9UN36 371 aaKnown RBP23.53■■□□□ 1.36
C2CD3-216ENST00000541922 F5P12259 2224 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 PIEZO1Q92508 2521 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 TADA3O75528 432 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 HLA-DRAP01903 254 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 TRIM49P0CI25 452 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 TRIM49CP0CI26 452 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 NBL1P41271 181 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 KPNA1P52294 538 aaPredicted RBP23.52■■□□□ 1.36
C2CD3-216ENST00000541922 MLLT6P55198 1093 aaPredicted RBP23.52■■□□□ 1.36
C2CD3-216ENST00000541922 PLCB2Q00722 1185 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 ENPEPQ07075 957 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 ZNF658Q5TYW1 1059 aaPredicted RBP23.52■■□□□ 1.36
C2CD3-216ENST00000541922 DENND5BQ6ZUT9 1274 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 CLDN23Q96B33 292 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 ZFYVE19Q96K21 471 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 ELOVL4Q9GZR5 314 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 TDP1Q9NUW8 608 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 SPATA6Q9NWH7 488 aaPredicted RBP23.52■■□□□ 1.36
C2CD3-216ENST00000541922 EHD2Q9NZN4 543 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 PCDHA5Q9Y5H7 936 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 ANAPC1Q9H1A4 1944 aa23.52■■□□□ 1.36
C2CD3-216ENST00000541922 CACNA1IQ9P0X4 2223 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 PROB1E7EW31 1015 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 F8VP50 259 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 ASS1P00966 412 aaKnown RBP23.51■■□□□ 1.35
C2CD3-216ENST00000541922 PRCPP42785 496 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 GCLMP48507 274 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 ERCC4Q92889 916 aaPredicted RBP23.51■■□□□ 1.35
C2CD3-216ENST00000541922 USP13Q92995 863 aaPredicted RBP23.51■■□□□ 1.35
C2CD3-216ENST00000541922 MSANTD3Q96H12 275 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 TNIP3Q96KP6 325 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 C8orf48Q96LL4 319 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 B3GNT5Q9BYG0 378 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 IMPG2Q9BZV3 1241 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 ZNF518BQ9C0D4 1074 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 SDCBP2Q9H190 292 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 C8orf33Q9H7E9 229 aaPredicted RBP23.51■■□□□ 1.35
C2CD3-216ENST00000541922 KIF9Q9HAQ2 790 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 TRPC7Q9HCX4 862 aa23.51■■□□□ 1.35
C2CD3-216ENST00000541922 CETN3O15182 167 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 CCNE1P24864 410 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 RPS9P46781 194 aaKnown RBP23.5■■□□□ 1.35
C2CD3-216ENST00000541922 PPP3CAQ08209 521 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 C1orf228Q6PIY5 440 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 SPATA20Q8TB22 786 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 EEF2KMTQ96G04 330 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 TSG101Q99816 390 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 GTPBP4Q9BZE4 634 aaKnown RBP23.5■■□□□ 1.35
C2CD3-216ENST00000541922 MMRN2Q9H8L6 949 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 CIZ1Q9ULV3 898 aaPredicted RBP23.5■■□□□ 1.35
C2CD3-216ENST00000541922 CCL26Q9Y258 94 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 ATP8B3O60423 1300 aa23.5■■□□□ 1.35
C2CD3-216ENST00000541922 PATJQ8NI35 1801 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 TRAV19A0A0A6YYK7 116 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 CLDN5O00501 218 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 LAMTOR5O43504 91 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 EPB41P11171 864 aaKnown RBP23.49■■□□□ 1.35
C2CD3-216ENST00000541922 COBLL1Q53SF7 1204 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 SPOPLQ6IQ16 392 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 FRMD5Q7Z6J6 570 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 TTC8Q8TAM2 541 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 MED10Q9BTT4 135 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.49■■□□□ 1.35
C2CD3-216ENST00000541922 GKN1Q9NS71 199 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 GTSE1Q9NYZ3 720 aa23.49■■□□□ 1.35
C2CD3-216ENST00000541922 KIF26AQ9ULI4 1882 aaPredicted RBP23.49■■□□□ 1.35
C2CD3-216ENST00000541922 GFRA3O60609 400 aa23.48■■□□□ 1.35
C2CD3-216ENST00000541922 KINO60870 393 aaKnown RBP23.48■■□□□ 1.35
C2CD3-216ENST00000541922 CKMP06732 381 aa23.48■■□□□ 1.35
C2CD3-216ENST00000541922 USP17L7P0C7H9 530 aa23.48■■□□□ 1.35
C2CD3-216ENST00000541922 SOX9P48436 509 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms