RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 DENND1BQ6P3S1 775 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 RNF168Q8IYW5 571 aaPredicted RBP29.4■■■□□ 2.3
CCM2-218ENST00000541586 PDCL2Q8N4E4 241 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 TOP6BLQ8N6T0 577 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 C1orf131Q8NDD1 294 aaKnown RBP29.4■■■□□ 2.3
CCM2-218ENST00000541586 TRIM11Q96F44 468 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 HERC2P3Q9BVR0 1158 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 ZNF518BQ9C0D4 1074 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 CHST7Q9NS84 486 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 STK39Q9UEW8 545 aa29.4■■■□□ 2.3
CCM2-218ENST00000541586 CNOT8Q9UFF9 292 aaKnown RBP29.4■■■□□ 2.3
CCM2-218ENST00000541586 TMEM265A0A087WTH1 108 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 CXCL14O95715 111 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 URODP06132 367 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 MYBL1P10243 752 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 YWHAHQ04917 246 aaPredicted RBP29.39■■■□□ 2.3
CCM2-218ENST00000541586 CAMK1Q14012 370 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 SGO2Q562F6 1265 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 PRSS55Q6UWB4 352 aaPredicted RBP29.39■■■□□ 2.3
CCM2-218ENST00000541586 DPH6Q7L8W6 267 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 METTL23Q86XA0 190 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 WDTC1Q8N5D0 677 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 C11orf70Q9BRQ4 267 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 ZBP1Q9H171 429 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 LHX5Q9H2C1 402 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 GOLPH3Q9H4A6 298 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 ADAM22Q9P0K1 906 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.39■■■□□ 2.3
CCM2-218ENST00000541586 CEP83Q9Y592 693 aa29.39■■■□□ 2.3
CCM2-218ENST00000541586 ARHGEF37A1IGU5 675 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 A8MXQ7 604 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 O00370 1275 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 IRS1P35568 1242 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 GLUD2P49448 558 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 CNGA2Q16280 664 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 C2CD6Q53TS8 623 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 VARS2Q5ST30 1063 aaKnown RBP29.38■■■□□ 2.29
CCM2-218ENST00000541586 ACOT1Q86TX2 421 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 ADGRF2Q8IZF7 708 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 MYRIPQ8NFW9 859 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 VCPIP1Q96JH7 1222 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 NUP85Q9BW27 656 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 MRPL17Q9NRX2 175 aaKnown RBP29.38■■■□□ 2.29
CCM2-218ENST00000541586 CDC23Q9UJX2 597 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 DSEQ9UL01 958 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 SAR1BQ9Y6B6 198 aa29.38■■■□□ 2.29
CCM2-218ENST00000541586 NCK2O43639 380 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 BUB1BO60566 1050 aaPredicted RBP29.37■■■□□ 2.29
CCM2-218ENST00000541586 CTSAP10619 480 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 GNL1P36915 607 aaPredicted RBP29.37■■■□□ 2.29
CCM2-218ENST00000541586 C1QBPQ07021 282 aaKnown RBP29.37■■■□□ 2.29
CCM2-218ENST00000541586 PTP4A2Q12974 167 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 TUBB2AQ13885 445 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 OVOS1Q6IE37 1185 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 MMS22LQ6ZRQ5 1243 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 SLFN11Q7Z7L1 901 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 C12orf29Q8N999 325 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 TUBB2BQ9BVA1 445 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 TLR10Q9BXR5 811 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 SNX25Q9H3E2 840 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 AVENQ9NQS1 362 aaPredicted RBP29.37■■■□□ 2.29
CCM2-218ENST00000541586 HCRTO43612 131 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 MTA2O94776 668 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 MICAL2O94851 1124 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 MMP8P22894 467 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 RRM1P23921 792 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 DSG1Q02413 1049 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 MEI1Q5TIA1 1274 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 KIAA0319Q5VV43 1072 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 DAAM2Q86T65 1068 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 CALR3Q96L12 384 aaKnown RBP29.37■■■□□ 2.29
CCM2-218ENST00000541586 UVRAGQ9P2Y5 699 aa29.37■■■□□ 2.29
CCM2-218ENST00000541586 LPXNO60711 386 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 RPL17P18621 184 aaKnown RBP29.36■■■□□ 2.29
CCM2-218ENST00000541586 TYMPP19971 482 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 WARSP23381 471 aaKnown RBP29.36■■■□□ 2.29
CCM2-218ENST00000541586 LMO2P25791 158 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 Q7L0L9 218 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 SYCE1Q8N0S2 351 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 ZNF564Q8TBZ8 553 aaPredicted RBP29.36■■■□□ 2.29
CCM2-218ENST00000541586 DPEP3Q9H4B8 488 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 SNX12Q9UMY4 172 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 STXBP5LQ9Y2K9 1186 aa29.36■■■□□ 2.29
CCM2-218ENST00000541586 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.35■■■□□ 2.29
CCM2-218ENST00000541586 CYP11A1P05108 521 aa29.35■■■□□ 2.29
CCM2-218ENST00000541586 PDGFRBP09619 1106 aa29.35■■■□□ 2.29
CCM2-218ENST00000541586 LIN9Q5TKA1 542 aa29.35■■■□□ 2.29
CCM2-218ENST00000541586 LCLAT1Q6UWP7 414 aa29.35■■■□□ 2.29
CCM2-218ENST00000541586 ANKS3Q6ZW76 656 aa29.35■■■□□ 2.29
CCM2-218ENST00000541586 SRGAP2O75044 1071 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 FAM163BP0C2L3 166 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 TERF1P54274 439 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 PSMD5Q16401 504 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 CTXN3Q4LDR2 81 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 LLGL2Q6P1M3 1020 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 PHLDB2Q86SQ0 1253 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 OSTM1Q86WC4 334 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 TMEM86AQ8N2M4 240 aa29.34■■■□□ 2.29
CCM2-218ENST00000541586 NGRNQ9NPE2 291 aaKnown RBP29.34■■■□□ 2.29
CCM2-218ENST00000541586 DDX43Q9NXZ2 648 aaKnown RBP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms