RNA–Protein interactions for RNA: ENST00000541427.1

KNTC1-211, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 641 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-211ENST00000541427 MS4A7Q9GZW8 240 aaPredicted RBP4.82□□□□□ -1.64
KNTC1-211ENST00000541427 KIAA1586Q9HCI6 787 aa4.82□□□□□ -1.64
KNTC1-211ENST00000541427 AFF4Q9UHB7 1163 aaKnown RBP4.82□□□□□ -1.64
KNTC1-211ENST00000541427 FAM50BQ9Y247 325 aa4.82□□□□□ -1.64
KNTC1-211ENST00000541427 TBC1D30Q9Y2I9 924 aa4.82□□□□□ -1.64
KNTC1-211ENST00000541427 MRPS17Q9Y2R5 130 aaKnown RBP4.82□□□□□ -1.64
KNTC1-211ENST00000541427 MPPED1O15442 326 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 ELFN1P0C7U0 828 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 CYP2C9P11712 490 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 SLC5A1P13866 664 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 PPIFP30405 207 aaKnown RBP4.81□□□□□ -1.64
KNTC1-211ENST00000541427 CLK3P49761 638 aaKnown RBP4.81□□□□□ -1.64
KNTC1-211ENST00000541427 NXPH1P58417 271 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 RPS16P62249 146 aaKnown RBP4.81□□□□□ -1.64
KNTC1-211ENST00000541427 SIM1P81133 766 aaPredicted RBP4.81□□□□□ -1.64
KNTC1-211ENST00000541427 MRPS35P82673 323 aaKnown RBP4.81□□□□□ -1.64
KNTC1-211ENST00000541427 MYO1EQ12965 1108 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 ARHGAP40Q5TG30 622 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 LAYNQ6UX15 382 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 ZDHHC24Q6UX98 284 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 KRT78Q8N1N4 520 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 ACTRT2Q8TDY3 377 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 MOGAT1Q96PD6 335 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 CXorf36Q9H7Y0 433 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 LRIT1Q9P2V4 623 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 DKK3Q9UBP4 350 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 SERTAD3Q9UJW9 196 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 OGDHLQ9ULD0 1010 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 NDRG4Q9ULP0 352 aaKnown RBP4.81□□□□□ -1.64
KNTC1-211ENST00000541427 SHOC2Q9UQ13 582 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 COX11Q9Y6N1 276 aa4.81□□□□□ -1.64
KNTC1-211ENST00000541427 CC2D2AQ9P2K1 1620 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 F8W8V4 182 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 PYCARD-AS1I3L0S3 204 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 APAF1O14727 1248 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 CSF1RP07333 972 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 XRCC6P12956 609 aaKnown RBP eCLIP4.8□□□□□ -1.64
KNTC1-211ENST00000541427 TRIM27P14373 513 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 IL1R1P14778 569 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 PCSK6P29122 969 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 TBX4P57082 545 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 EIF2B5Q13144 721 aaKnown RBP4.8□□□□□ -1.64
KNTC1-211ENST00000541427 PLA1AQ53H76 456 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 COBLL1Q53SF7 1204 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 ICE2Q659A1 982 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 KAZNQ674X7 775 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 RGS7BPQ6MZT1 257 aaPredicted RBP4.8□□□□□ -1.64
KNTC1-211ENST00000541427 RD3Q7Z3Z2 195 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 PEG10Q86TG7 708 aaKnown RBP4.8□□□□□ -1.64
KNTC1-211ENST00000541427 RFKQ969G6 155 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 MSLNLQ96KJ4 702 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 NELL2Q99435 816 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 BTBD1Q9H0C5 482 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 NUP62CLQ9H1M0 184 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 ZNF287Q9HBT7 754 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 A1CFQ9NQ94 594 aaKnown RBP4.8□□□□□ -1.64
KNTC1-211ENST00000541427 KLC4Q9NSK0 619 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 GEMIN8Q9NWZ8 242 aaKnown RBP4.8□□□□□ -1.64
KNTC1-211ENST00000541427 PRDM2Q13029 1718 aa4.8□□□□□ -1.64
KNTC1-211ENST00000541427 MBD3L4A6NDZ8 208 aaPredicted RBP4.79□□□□□ -1.64
KNTC1-211ENST00000541427 MBD3L3A6NE82 208 aaPredicted RBP4.79□□□□□ -1.64
KNTC1-211ENST00000541427 PQBP1O60828 265 aaKnown RBP4.79□□□□□ -1.64
KNTC1-211ENST00000541427 ZKSCAN1P17029 563 aaPredicted RBP4.79□□□□□ -1.64
KNTC1-211ENST00000541427 LRPAP1P30533 357 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 CXCR5P32302 372 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 DGKEP52429 567 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 KRT17Q04695 432 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 SAFBQ15424 915 aaKnown RBP eCLIP4.79□□□□□ -1.64
KNTC1-211ENST00000541427 NBPF8Q3BBV2 869 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 SLC44A4Q53GD3 710 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 PRR16Q569H4 304 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 SFRP4Q6FHJ7 346 aaPredicted RBP4.79□□□□□ -1.64
KNTC1-211ENST00000541427 MAVSQ7Z434 540 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 ATG4AQ8WYN0 398 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 SLC9A6Q92581 669 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 SPSB4Q96A44 273 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 FKBP10Q96AY3 582 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 PBKQ96KB5 322 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 PRDM13Q9H4Q3 707 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 CORO2BQ9UQ03 480 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 PAXBP1Q9Y5B6 917 aa4.79□□□□□ -1.64
KNTC1-211ENST00000541427 ABCC8Q09428 1581 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 CFTRP13569 1480 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 LINC00473A8K010 186 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 PROB1E7EW31 1015 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 PMM2O15305 246 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 PRC1O43663 620 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 HMGB1P09429 215 aaKnown RBP4.78□□□□□ -1.64
KNTC1-211ENST00000541427 KCNA3P22001 575 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 KLRC1P26715 233 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 GRIA3P42263 894 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 PIK3CBP42338 1070 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 RARRES1P49788 294 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 HTRA4P83105 476 aaPredicted RBP4.78□□□□□ -1.64
KNTC1-211ENST00000541427 E2F2Q14209 437 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 HLTFQ14527 1009 aaKnown RBP eCLIP4.78□□□□□ -1.64
KNTC1-211ENST00000541427 TBCCQ15814 346 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 MGAT5BQ3V5L5 792 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 KCTD20Q7Z5Y7 419 aa4.78□□□□□ -1.64
KNTC1-211ENST00000541427 DTX2Q86UW9 622 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms