RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 KCNK18Q7Z418 384 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 SFR1Q86XK3 245 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 GLYCTKQ8IVS8 523 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 TRIM42Q8IWZ5 723 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 PRELID2Q8N945 189 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 DBF4BQ8NFT6 615 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 CYP2W1Q8TAV3 490 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 SLC5A5Q92911 643 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 BORCS6Q96GS4 357 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 SPATA33Q96N06 139 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 FAM210AQ96ND0 272 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 SENP7Q9BQF6 1050 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 REEP2Q9BRK0 252 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 FRMD8P1Q9BZ68 369 aaPredicted RBP10.95□□□□□ -0.66
CHFR-219ENST00000541341 INTS2Q9H0H0 1204 aaKnown RBP10.95□□□□□ -0.66
CHFR-219ENST00000541341 VCX3BQ9H321 246 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 EPB41L4BQ9H329 900 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 SEMA4AQ9H3S1 761 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 VCX3AQ9NNX9 186 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 KCNH7Q9NS40 1196 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 FGFR1OP2Q9NVK5 253 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 DMAC2Q9NW81 257 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 TBC1D7Q9P0N9 293 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 DNAJB4Q9UDY4 337 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 ANAPC5Q9UJX4 755 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 COG5Q9UP83 839 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 EXOC7Q9UPT5 735 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 LRCH1Q9Y2L9 728 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 PLXNA4Q9HCM2 1894 aa10.95□□□□□ -0.66
CHFR-219ENST00000541341 MSH4O15457 936 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 DHX15O43143 795 aaKnown RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 ZC3H11AO75152 810 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHFR-219ENST00000541341 F2P00734 622 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 CXCL10P02778 98 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 FTLP02792 175 aaPredicted RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 CYP1A2P05177 515 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 ARP10275 920 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 IL9P15248 144 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 KCNA2P16389 499 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 KCNA5P22460 613 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 BRD2P25440 801 aaKnown RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 MARK3P27448 753 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 PTPN4P29074 926 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 GTF2H1P32780 548 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 PHBP35232 272 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 VHLP40337 213 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 PEX5P50542 639 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 PAPOLAP51003 745 aaKnown RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 MXRA7P84157 204 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 BFSP1Q12934 665 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 PTK7Q13308 1070 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 LAMC2Q13753 1193 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 TBCCQ15814 346 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 CCNG2Q16589 344 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 ZNF568Q3ZCX4 644 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 SGO2Q562F6 1265 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 SH2D4BQ5SQS7 431 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 B3GNT9Q6UX72 402 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 CATSPER3Q86XQ3 398 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 FBXO22Q8NEZ5 403 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 PPTC7Q8NI37 304 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 LNX1Q8TBB1 728 aaPredicted RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 LRRC8CQ8TDW0 803 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 LZICQ8WZA0 190 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 NR1H4Q96RI1 486 aaPredicted RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 SMC6Q96SB8 1091 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 RIT2Q99578 217 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 RAD9AQ99638 391 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 KATNAL1Q9BW62 490 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 C1QTNF1Q9BXJ1 281 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 OSBPL1AQ9BXW6 950 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 MIS12Q9H081 205 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 SUDS3Q9H7L9 328 aaPredicted RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 TLE6Q9H808 572 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 AGO4Q9HCK5 861 aaKnown RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 AVENQ9NQS1 362 aaPredicted RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 ABCF3Q9NUQ8 709 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 SEPT11Q9NVA2 429 aaKnown RBP10.94□□□□□ -0.66
CHFR-219ENST00000541341 NDUFA13Q9P0J0 144 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 ASIC3Q9UHC3 531 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 SSX2IPQ9Y2D8 614 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 EVPLQ92817 2033 aa10.94□□□□□ -0.66
CHFR-219ENST00000541341 ABHD14A-ACY1A0A1B0GW23 586 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 POTEB3A0JP26 581 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 MAGEA13PA6NCF6 341 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 H3BQ06 376 aaPredicted RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 HAS3O00219 553 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 TREHO43280 583 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 SMIM24O75264 130 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 LGR5O75473 907 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 PSMD10O75832 226 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 SHBGP04278 402 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 ABCB4P21439 1286 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 UBA1P22314 1058 aaKnown RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 SSTR3P32745 418 aaPredicted RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 IFNAR2P48551 515 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 RPL26P61254 145 aaKnown RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 ERVK-21P61565 698 aa10.93□□□□□ -0.66
CHFR-219ENST00000541341 IFI35P80217 286 aaPredicted RBP10.93□□□□□ -0.66
CHFR-219ENST00000541341 OCRLQ01968 901 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms