RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 ANAPC5Q9UJX4 755 aa15.07■□□□□ 0
SFSWAP-210ENST00000541286 NOCTQ9UK39 431 aaKnown RBP15.07■□□□□ 0
SFSWAP-210ENST00000541286 R3HDM2Q9Y2K5 976 aaKnown RBP15.07■□□□□ 0
SFSWAP-210ENST00000541286 ZNF236Q9UL36 1845 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 CFAP73A6NFT4 308 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 PIAS1O75925 651 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 RARGP13631 454 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 ATF2P15336 505 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 ATF7P17544 494 aaPredicted RBP15.06■□□□□ 0
SFSWAP-210ENST00000541286 CNGA2Q16280 664 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 FAM182AQ5T1J6 154 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 KIAA0319LQ8IZA0 1049 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 TMEM161BQ8NDZ6 487 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 TET1Q8NFU7 2136 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 KIFAP3Q92845 792 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 NUDCD1Q96RS6 583 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 HERPUD2Q9BSE4 406 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 NIFKQ9BYG3 293 aaKnown RBP15.06■□□□□ 0
SFSWAP-210ENST00000541286 HAPLN2Q9GZV7 340 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 RAB20Q9NX57 234 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 ARID2Q68CP9 1835 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 hCG_2014768A0A024R1R8 64 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 POC1B-GALNT4F8VUJ3 575 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 SPAG7O75391 227 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 ADSSP30520 456 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 CPT1AP50416 773 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 ACLYP53396 1101 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 WNT7BP56706 349 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 GJA9P57773 515 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 PLCB3Q01970 1234 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 MGAT5Q09328 741 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 DMP1Q13316 513 aaPredicted RBP15.06■□□□□ 0
SFSWAP-210ENST00000541286 SV2AQ7L0J3 742 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 FAM71AQ8IYT1 594 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 FBXL13Q8NEE6 735 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 DTX3LQ8TDB6 740 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 UTP4Q969X6 686 aaKnown RBP15.06■□□□□ 0
SFSWAP-210ENST00000541286 PLVAPQ9BX97 442 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 PCYOX1Q9UHG3 505 aa15.06■□□□□ 0
SFSWAP-210ENST00000541286 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.06■□□□□ 0
SFSWAP-210ENST00000541286 MAFO75444 373 aaPredicted RBP15.05■□□□□ 0
SFSWAP-210ENST00000541286 SUN1O94901 812 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 CTNNA2P26232 953 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 ACOT2P49753 483 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 ITIH4Q14624 930 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 TMED2Q15363 201 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 SLC39A4Q6P5W5 647 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 RDM1Q8NG50 284 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 NLRP7Q8WX94 980 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 EMID1Q96A84 441 aaPredicted RBP15.05■□□□□ 0
SFSWAP-210ENST00000541286 STMN4Q9H169 189 aaPredicted RBP15.05■□□□□ 0
SFSWAP-210ENST00000541286 HES2Q9Y543 173 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 A0A0C4DFX4 3053 aa15.05■□□□□ 0
SFSWAP-210ENST00000541286 TNRC18O15417 2968 aaPredicted RBP15.05■□□□□ 0
SFSWAP-210ENST00000541286 HBP1O60381 514 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 RALAP11233 206 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 RIPK1Q13546 671 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 MPP2Q14168 576 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 TMEM192Q8IY95 271 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 EPAS1Q99814 870 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 PCDHA3Q9Y5H8 950 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 UMODL1Q5DID0 1318 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 SPTBN5Q9NRC6 3674 aaKnown RBP15.05■□□□□ -0
SFSWAP-210ENST00000541286 THSD7BQ9C0I4 1608 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 A6NHS1 94 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 CBX6O95503 412 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 IFNB1P01574 187 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 CDR2Q01850 454 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 ZNF394Q53GI3 561 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 CCSAPQ6IQ19 270 aaPredicted RBP15.05■□□□□ -0
SFSWAP-210ENST00000541286 CCHCR1Q8TD31 782 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 P3H4Q92791 437 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 GTF3C4Q9UKN8 822 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 TBX20Q9UMR3 447 aa15.05■□□□□ -0
SFSWAP-210ENST00000541286 PDE4DIPQ5VU43 2346 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 CHD9Q3L8U1 2897 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 BHMG1C9JSJ3 638 aaPredicted RBP15.04■□□□□ -0
SFSWAP-210ENST00000541286 PQBP1O60828 265 aaKnown RBP15.04■□□□□ -0
SFSWAP-210ENST00000541286 GAS8O95995 478 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 EPHB2P29323 1055 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 NSFP46459 744 aaKnown RBP15.04■□□□□ -0
SFSWAP-210ENST00000541286 ATP13A4Q4VNC1 1196 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 SPATA21Q7Z572 469 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 SLAIN1Q8ND83 568 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 B4GALNT2Q8NHY0 566 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 PXYLP1Q8TE99 480 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 RUNDC3BQ96NL0 473 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 FNBP1Q96RU3 617 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 KCND2Q9NZV8 630 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 LOXHD1Q8IVV2 1947 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 GOLGA8SH3BPF8 625 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 GOLGA8MH3BSY2 632 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 CFHP08603 1231 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 KRT10P13645 584 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 SCNN1BP51168 640 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 BNIP1Q12981 228 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 MUM1Q2TAK8 710 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 CCNJLQ8IV13 435 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 SLC9A9Q8IVB4 645 aa15.04■□□□□ -0
SFSWAP-210ENST00000541286 CYP4X1Q8N118 509 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms