RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 ADORA2BP29275 332 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 OR1D2P34982 312 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CA8P35219 290 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 PDE6CP51160 858 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CCZ1BP86790 482 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CCZ1P86791 482 aaPredicted RBP9.91□□□□□ -0.82
DDX55-208ENST00000541259 CDK17Q00537 523 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 TSPY1Q01534 308 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CDR2Q01850 454 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CNGA2Q16280 664 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 GOLGA7BQ2TAP0 167 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 ASTE1Q2TB18 679 aaPredicted RBP9.91□□□□□ -0.82
DDX55-208ENST00000541259 PLPP4Q5VZY2 271 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 CYP26C1Q6V0L0 522 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 RAD9BQ6WBX8 426 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 RNF19BQ6ZMZ0 732 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 TMC7Q7Z402 723 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 PASD1Q8IV76 773 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 FUKQ8N0W3 1084 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 SLC30A5Q8TAD4 765 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 UBA3Q8TBC4 463 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 MYCBPAPQ8TBZ2 947 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 SLC2A14Q8TDB8 520 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 GDPD5Q8WTR4 605 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 MYLPFQ96A32 169 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 PCED1BQ96HM7 432 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 PGLYRP2Q96PD5 576 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 TCF25Q9BQ70 676 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 MED10Q9BTT4 135 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 C11orf84Q9BUA3 381 aaPredicted RBP9.91□□□□□ -0.82
DDX55-208ENST00000541259 REPIN1Q9BWE0 567 aaKnown RBP9.91□□□□□ -0.82
DDX55-208ENST00000541259 NHEJ1Q9H9Q4 299 aaPredicted RBP9.91□□□□□ -0.82
DDX55-208ENST00000541259 MRPL17Q9NRX2 175 aaKnown RBP9.91□□□□□ -0.82
DDX55-208ENST00000541259 TMEM30AQ9NV96 361 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 KIAA1257Q9ULG3 409 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 BACE2Q9Y5Z0 518 aa9.91□□□□□ -0.82
DDX55-208ENST00000541259 MYO16Q9Y6X6 1858 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 A0A087X0T9 212 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 WDR27A2RRH5 827 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 TULP2O00295 520 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 SOX1O00570 391 aaPredicted RBP9.9□□□□□ -0.82
DDX55-208ENST00000541259 FSCN2O14926 492 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 TEX28O15482 410 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 BEST1O76090 585 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 CNPP09543 421 aaKnown RBP9.9□□□□□ -0.82
DDX55-208ENST00000541259 FAM228BP0C875 321 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 CPB1P15086 417 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 CACNA2D1P54289 1103 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 ROR1Q01973 937 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 CYP27A1Q02318 531 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 UBE3AQ05086 875 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 GFPT1Q06210 699 aaPredicted RBP9.9□□□□□ -0.82
DDX55-208ENST00000541259 LRIT3Q3SXY7 679 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 ARHGAP17Q68EM7 881 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 SLC8B1Q6J4K2 584 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 LCLAT1Q6UWP7 414 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 TTC30AQ86WT1 665 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 TMTC1Q8IUR5 882 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 FMNL3Q8IVF7 1028 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 DCP1BQ8IZD4 617 aaKnown RBP9.9□□□□□ -0.82
DDX55-208ENST00000541259 WDTC1Q8N5D0 677 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 KLHL5Q96PQ7 755 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 HNRNPABQ99729 332 aaKnown RBP9.9□□□□□ -0.82
DDX55-208ENST00000541259 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.9□□□□□ -0.82
DDX55-208ENST00000541259 TMUB1Q9BVT8 246 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 ZNF518BQ9C0D4 1074 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 CRISPLD1Q9H336 500 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 RXFP1Q9HBX9 757 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 ENTPD7Q9NQZ7 604 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 TLR9Q9NR96 1032 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 SPTLC3Q9NUV7 552 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 SEPT11Q9NVA2 429 aaKnown RBP9.9□□□□□ -0.82
DDX55-208ENST00000541259 TAS2R14Q9NYV8 317 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 ADAMTS1Q9UHI8 967 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 CYTH4Q9UIA0 394 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 TSPAN16Q9UKR8 245 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 PCDHGC3Q9UN70 934 aa9.9□□□□□ -0.82
DDX55-208ENST00000541259 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.9□□□□□ -0.82
DDX55-208ENST00000541259 BZW2Q9Y6E2 419 aaKnown RBP9.9□□□□□ -0.82
DDX55-208ENST00000541259 PRRC2BQ5JSZ5 2229 aaKnown RBP9.9□□□□□ -0.83
DDX55-208ENST00000541259 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.89□□□□□ -0.83
DDX55-208ENST00000541259 A0A1W2PPC1 479 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 SSU72P8A0A1W2PR75 194 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 MTMR11A4FU01 709 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 C2orf71A6NGG8 1288 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 TMCO5BA8MYB1 307 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 BHMG1C9JSJ3 638 aaPredicted RBP9.89□□□□□ -0.83
DDX55-208ENST00000541259 M0QYV0 167 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 ZNF263O14978 683 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 MED7O43513 233 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 LPXNO60711 386 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 SEC24AO95486 1093 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 CYP1A1P04798 512 aaPredicted RBP9.89□□□□□ -0.83
DDX55-208ENST00000541259 SPATA31D3P0C874 917 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 BDNFP23560 247 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 CYP2F1P24903 491 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 DEKP35659 375 aaKnown RBP9.89□□□□□ -0.83
DDX55-208ENST00000541259 KIF11P52732 1056 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 GPR17Q13304 367 aa9.89□□□□□ -0.83
DDX55-208ENST00000541259 SMC1AQ14683 1233 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms