RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 PCDHA10Q9Y5I2 948 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 KIAA1217Q5T5P2 1943 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 BPTFQ12830 3046 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 EXTL3O43909 919 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 GRAP2O75791 330 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 SP2Q02086 613 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 PTK7Q13308 1070 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 SLC45A4Q5BKX6 768 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 FAM160B2Q86V87 743 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 PHF13Q86YI8 300 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 RCOR2Q8IZ40 523 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 PDCD7Q8N8D1 485 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 USP6NLQ92738 828 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 ASCC2Q9H1I8 757 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 CYP26B1Q9NR63 512 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 ARHGEF4Q9NR80 690 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 PIH1D1Q9NWS0 290 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 IP6K2Q9UHH9 426 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 POLIQ9UNA4 740 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 C2CD2Q9Y426 696 aa10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 FARP1Q9Y4F1 1045 aaPredicted RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 MYO18AQ92614 2054 aaKnown RBP10.86□□□□□ -0.67
CDC42SE1-207ENST00000540998 SIGLEC16A6NMB1 481 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 FCHO1O14526 889 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 LYPLA2O95372 231 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TROVE2P10155 538 aaKnown RBP eCLIP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 CD19P15391 556 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PSMA2P25787 234 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 RASSF2P50749 326 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 POLE2P56282 527 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 CCDC142Q17RM4 750 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 SAMD3Q8N6K7 520 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 ENDOVQ8N8Q3 282 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 CEP120Q8N960 986 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 AKT1S1Q96B36 256 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 FAM81BQ96LP2 452 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 MMP19Q99542 508 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 BTBD10Q9BSF8 475 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 C20orf27Q9GZN8 174 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TCRBV9S1A1TA0A576 114 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 C3orf70A6NLC5 250 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 MT-ND3P03897 115 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 GJB1P08034 283 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 KLC1Q07866 573 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PEX6Q13608 980 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PSMD6Q15008 389 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PTPN20Q4JDL3 420 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TDRPQ86YL5 185 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 RIBC1Q8N443 379 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PPM1NQ8N819 430 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 FAM151AQ8WW52 585 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 RSAD2Q8WXG1 361 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 RBM41Q96IZ5 413 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PGLYRP2Q96PD5 576 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TSC22D3Q99576 134 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TTC1Q99614 292 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TCHPQ9BT92 498 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 SPATS2LQ9NUQ6 558 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 ARHGAP28Q9P2N2 729 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 WDR81Q562E7 1941 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 LRCH4O75427 683 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 CSDE1O75534 798 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 LUC7L3O95232 432 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 NR3C2P08235 984 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 DLDP09622 509 aaKnown RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 ESRRAP11474 423 aaPredicted RBP10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 CDO1Q16878 200 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PPP1R15BQ5SWA1 713 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 C1orf228Q6PIY5 440 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 LRRC74BQ6ZQY2 392 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 LMNTD2Q8IXW0 634 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 NAT8LQ8N9F0 302 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 SLC35B2Q8TB61 432 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TRIM11Q96F44 468 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TTC25Q96NG3 672 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 TRIM55Q9BYV6 548 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 PCDH9Q9HC56 1237 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 KRT82Q9NSB4 513 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 GPATCH2LQ9NWQ4 482 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 HMGXB4Q9UGU5 601 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 SCINQ9Y6U3 715 aa10.85□□□□□ -0.67
CDC42SE1-207ENST00000540998 BAG2O95816 211 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ALDH18A1P54886 795 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ACTR2P61160 394 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 UBAP2LQ14157 1087 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 EMC2Q15006 297 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 RGS9BPQ6ZS82 235 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 RFX6Q8HWS3 928 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ARID3BQ8IVW6 561 aaPredicted RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 UNC5BQ8IZJ1 945 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ATP11CQ8NB49 1132 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 HIPK4Q8NE63 616 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 JDP2Q8WYK2 163 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 FAM136AQ96C01 138 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 PIWIL1Q96J94 861 aaKnown RBP10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 DCLRE1BQ9H816 532 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 CISHQ9NSE2 258 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 ANKEF1Q9NU02 776 aa10.84□□□□□ -0.67
CDC42SE1-207ENST00000540998 SNCAIPQ9Y6H5 919 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms